Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dugesia_20japonica_20[genbank_20GCA_5F001938525.1_202017-01-06] 648,594 sequences; 854,187,087 total letters Query= NC_004062.1 Length=119217 Score E Sequences producing significant alignments: (Bits) Value seq375912 141 7e-29 seq247457 141 7e-29 seq238832 141 7e-29 seq529312 120 2e-22 seq646337 113 3e-20 seq231077 111 1e-19 seq504844 107 1e-18 seq628701 93.3 3e-14 seq627119 84.2 2e-11 >seq375912 Length=2531 Score = 141 bits (156), Expect = 7e-29 Identities = 177/242 (73%), Gaps = 2/242 (1%) Strand=Plus/Plus Query 42883 CCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGAC 42942 || ||||| | || ||| || ||||| | ||| |||||||| | ||||||||| ||| Sbjct 1536 CCACCACGTAATCGTAAAACTAAATGTAAAGTTGATTCCTTTTGGATATTGTAATCAGAC 1595 Query 42943 AATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGC 43002 ||||| ||| | || || |||||||| || |||||||| | ||| |||||||| | || Sbjct 1596 AATGTTCGTCCATCTTCTAATTGTTTCCCAGCAAAAATAAGTCGTTGTTGATCTGGAGGA 1655 Query 43003 ACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACG 43062 | ||||| || || |||| |||| || | ||| |||||||| | ||||| Sbjct 1656 ATTCCTTCCTTATCTTGGATCTTTGCTTTTACATTTTCAATTGTGTCGCTTGATTCGACT 1715 Query 43063 TCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCATTTTC--TTAATTT 43120 || | |||||||| || || || || ||||||||||| |||||||| || |||||| Sbjct 1716 TCAAGAGTTATAGTCTTACCAGTAAGTGTTTTCACAAATATTTGCATCGTCAATTAATTC 1775 Query 43121 TA 43122 || Sbjct 1776 TA 1777 >seq247457 Length=2460 Score = 141 bits (156), Expect = 7e-29 Identities = 177/242 (73%), Gaps = 2/242 (1%) Strand=Plus/Minus Query 42883 CCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGAC 42942 || ||||| | || ||| || ||||| | ||| |||||||| | ||||||||| ||| Sbjct 1365 CCACCACGTAATCGTAAAACTAAATGTAAAGTTGATTCCTTTTGGATATTGTAATCAGAC 1306 Query 42943 AATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGC 43002 ||||| ||| | || || |||||||| || |||||||| | ||| |||||||| | || Sbjct 1305 AATGTTCGTCCATCTTCTAATTGTTTCCCAGCAAAAATAAGTCGTTGTTGATCTGGAGGA 1246 Query 43003 ACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACG 43062 | ||||| || || |||| |||| || | ||| |||||||| | ||||| Sbjct 1245 ATTCCTTCCTTATCTTGGATCTTTGCTTTTACATTTTCAATTGTGTCGCTTGATTCGACT 1186 Query 43063 TCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCATTTTC--TTAATTT 43120 || | |||||||| || || || || ||||||||||| |||||||| || |||||| Sbjct 1185 TCAAGAGTTATAGTCTTACCAGTAAGTGTTTTCACAAATATTTGCATCGTCAATTAATTC 1126 Query 43121 TA 43122 || Sbjct 1125 TA 1124 >seq238832 Length=2299 Score = 141 bits (156), Expect = 7e-29 Identities = 177/242 (73%), Gaps = 2/242 (1%) Strand=Plus/Minus Query 42883 CCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGAC 42942 || ||||| | || ||| || ||||| | ||| |||||||| | ||||||||| ||| Sbjct 1204 CCACCACGTAATCGTAAAACTAAATGTAAAGTTGATTCCTTTTGGATATTGTAATCAGAC 1145 Query 42943 AATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGC 43002 ||||| ||| | || || |||||||| || |||||||| | ||| |||||||| | || Sbjct 1144 AATGTTCGTCCATCTTCTAATTGTTTCCCAGCAAAAATAAGTCGTTGTTGATCTGGAGGA 1085 Query 43003 ACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACG 43062 | ||||| || || |||| |||| || | ||| |||||||| | ||||| Sbjct 1084 ATTCCTTCCTTATCTTGGATCTTTGCTTTTACATTTTCAATTGTGTCGCTTGATTCGACT 1025 Query 43063 TCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCATTTTC--TTAATTT 43120 || | |||||||| || || || || ||||||||||| |||||||| || |||||| Sbjct 1024 TCAAGAGTTATAGTCTTACCAGTAAGTGTTTTCACAAATATTTGCATCGTCAATTAATTC 965 Query 43121 TA 43122 || Sbjct 964 TA 963 >seq529312 Length=2362 Score = 120 bits (132), Expect = 2e-22 Identities = 166/232 (72%), Gaps = 4/232 (2%) Strand=Plus/Minus Query 42883 CCTCCACGCAGTCTTAACACCAAATGGATAGTGCTC--TCCTTTTGCACATTGTAATCGG 42940 || ||||| |||| | || ||||| ||||| | |||||||| | |||||| || | Sbjct 1904 CCACCACGAAGTCGAAGAACTAAATG--TAGTGTTGATTCCTTTTGAATATTGTAGTCTG 1847 Query 42941 ACAATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCG 43000 | || || || | || || | ||| || || |||||||| | ||| |||||||| | | Sbjct 1846 ATAAAGTGCGACCATCTTCAAGTTGCTTACCAGCAAAAATAAGTCGTTGTTGATCAGGTG 1787 Query 43001 GCACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGA 43060 | | | |||||| || ||| |||| || | ||| ||||| || ||| | Sbjct 1786 GAAYTCYTTCTTTATCTTGAATCTTTGCTTTAACATTTTCAATAGTGTCAGAAGACTCAA 1727 Query 43061 CGTCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCATTTT 43112 | |||| ||||||||| ||||| ||||| ||||| ||||||||||||||||| Sbjct 1726 CTTCTAACGTTATAGTCTTTCCAGTTAGTGTTTTAACAAAAATTTGCATTTT 1675 >seq646337 Length=12778 Score = 113 bits (124), Expect = 3e-20 Identities = 162/227 (71%), Gaps = 2/227 (1%) Strand=Plus/Minus Query 42887 CACGCAGTCTTAACACCAAATGGA-TAGTGCTCTCCTTTTGCACATTGTAATCGGACAAT 42945 |||| |||| | || ||||| | || || | |||||||| | |||||| || || || Sbjct 2822 CACGAAGTCGAAGAACTAAATGTAGTATTGAT-TCCTTTTGAATATTGTAGTCTGATAAA 2764 Query 42946 GTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGCACA 43005 || || | || || | ||| || || |||||||| | ||| |||||||| | || | Sbjct 2763 GTGCGACCATCTTCAAGTTGCTTACCAGCAAAAATAAGTCGTTGTTGATCAGGTGGAAYT 2704 Query 43006 CCTTCTTTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACGTCT 43065 | |||||| || ||| |||| || | ||| ||||| || ||| || ||| Sbjct 2703 CYTTCTTTATCTTGAATCTTTGCTTTAACATTTTCAATAGTGTCAGAAGACTCAACTTCT 2644 Query 43066 ACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCATTTT 43112 | ||||||||| ||||| ||||| ||||| ||||||||||||| ||| Sbjct 2643 AACGTTATAGTCTTTCCAGTTAGTGTTTTAACAAAAATTTGCACTTT 2597 >seq231077 Length=1080 Score = 111 bits (122), Expect = 1e-19 Identities = 159/224 (71%), Gaps = 0/224 (0%) Strand=Plus/Minus Query 42886 CCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGACAAT 42945 ||| ||| || |||||||||||| | ||| || ||||| | ||| ||||| | ||| Sbjct 594 CCAGGCAATCGTAACACCAAATGTAAAGTTGATTCTTTTTGAATATTATAATCAGGTAAT 535 Query 42946 GTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGCACA 43005 || || | || ||||||||||| || || ||||| | ||| |||||||| | || | Sbjct 534 GTTCGACCATCTTCCAATTGTTTCCCAGCGAAAATAAGTCGTTGTTGATCAGAAGGAATT 475 Query 43006 CCTTCTTTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACGTCT 43065 |||||||| || ||| |||| || | ||| || || | || || || ||| Sbjct 474 CCTTCTTTATCTTCGATTTTTGCTTTTACATTTTCAATAGTATCACTTGCTTCAACTTCT 415 Query 43066 ACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109 | || ||||| || || |||| |||||||||||||||| ||| Sbjct 414 AAAGTGATAGTCTTGCCAGTTAATGTTTTCACAAAAATTTCCAT 371 >seq504844 Length=3026 Score = 107 bits (118), Expect = 1e-18 Identities = 169/241 (70%), Gaps = 2/241 (1%) Strand=Plus/Plus Query 42883 CCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGAC 42942 ||||| || | || ||| || ||||| | ||| || ||||| | ||||||||| || Sbjct 1531 CCTCCTCGTAATCGTAAAACTAAATGTAAAGTTGATTCTTTTTGAATATTGTAATCAGAT 1590 Query 42943 AATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGC 43002 ||||| || | || ||||||||||| || ||||| || | ||| |||||||| | || Sbjct 1591 AATGTTCGGCCATCTTCCAATTGTTTTCCAGCAAATATAAGTCGTTGTTGATCTGGTGGA 1650 Query 43003 ACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACG 43062 | ||||||| || | | ||||||| | | | ||| || | | || || Sbjct 1651 ATTCCTTCTTCATCTTGTACCTTTGCTTTGACGTTTTCTATTGTATCACTTGATTCAACT 1710 Query 43063 TCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCATTTTCTTAATTTTA 43122 || | || |||||||| || || || ||||| ||||||||||||| ||||| || ||| Sbjct 1711 TCAATAGTGATAGTTTTCCCAGTAAGTGTTTTAACAAAAATTTGCA--TTCTTTATGTTA 1768 Query 43123 T 43123 | Sbjct 1769 T 1769 >seq628701 Length=3193 Score = 93.3 bits (102), Expect = 3e-14 Identities = 152/219 (69%), Gaps = 0/219 (0%) Strand=Plus/Plus Query 42892 AGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGACAATGTACGT 42951 ||||| | |||||||| | |||||| |||||||| | ||| ||||| || || || | Sbjct 1354 AGTCTAAGAACCAAATGAAGAGTGCTTTCCTTTTGAATATTATAATCAGATAAAGTTCTG 1413 Query 42952 TCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGCACACCTTCT 43011 | || || ||||| || || || || || | || |||||||| | || | ||| ||| Sbjct 1414 CCATCTTCTAATTGCTTTCCAGCGAAGATAAGACGTTGTTGATCTGGAGGAATACCCTCT 1473 Query 43012 TTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACGTCTACCGTT 43071 || || ||| | || || | ||| ||||| || || || |||| || Sbjct 1474 TTGTCTTGGATTTTTGCCTTAACATTTTCAATAGTGTCCGAAGATTCTACCTCTAAGGTA 1533 Query 43072 ATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCATT 43110 || ||||| || || || ||||| ||||||||||||||| Sbjct 1534 ATTGTTTTACCCGTGAGGGTTTTAACAAAAATTTGCATT 1572 >seq627119 Length=2126 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 42898 AACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGACAATGTACGTTCGTCG 42957 || || ||||| | ||| || ||||| | ||||||||| |||||||| | | || Sbjct 1192 AAAACTAAATGTAAAGTTGATTCTTTTTGAATATTGTAATCAGACAATGTTCTGCCATCT 1133 Query 42958 TCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGCACACCTTCTTTTTCG 43017 || || ||||| || ||||| || | ||| |||||||| | || | ||||| || || Sbjct 1132 TCTAACTGTTTTCCAGCAAATATAAGTCGTTGTTGATCTGGTGGAATTCCTTCCTTATCT 1073 Query 43018 CTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACGTCTACCGTTATAGTT 43077 |||| | |||| || | | | ||| || | | || || || | || |||||| Sbjct 1072 TGGATCTTCGCTTTTACATTTTCTATTGTATCACTTGATTCAACTTCAAGAGTGATAGTT 1013 Query 43078 TTTCCGGTTAGAGTTTTCACAAAAATTTG 43106 || || || || ||||||||||| || || Sbjct 1012 TTCCCAGTAAGTGTTTTCACAAATATCTG 984 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 378354972706452