Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dugesia_20japonica_20[genbank_20GCA_5F001938525.1_202017-01-06] 648,594 sequences; 854,187,087 total letters Query= NC_004117.1 Length=158482 Score E Sequences producing significant alignments: (Bits) Value seq375912 134 1e-26 seq247457 134 1e-26 seq238832 134 1e-26 seq504844 118 1e-21 seq627119 107 2e-18 seq231077 104 2e-17 seq22558 96.9 3e-15 >seq375912 Length=2531 Score = 134 bits (148), Expect = 1e-26 Identities = 168/228 (74%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017 || || ||||| || ||||||||||| | || ||||| ||||| || |||||||| | Sbjct 1536 CCACCACGTAATCGTAAAACTAAATGTAAAGTTGATTCCTTTTGGATATTGTAATCAGAC 1595 Query 143018 ATTGTGC-TCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 143076 | ||| | || | ||||| | |||||| |||||| | || || ||||| ||||| ||||| Sbjct 1596 AATGTTCGTCCA-TCTTCTAATTGTTTCCCAGCAAAAATAAGTCGTTGTTGATCTGGAGG 1654 Query 143077 TATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTAC 143136 || ||||| || || || ||| ||||| | ||| | ||||| | | ||| || Sbjct 1655 AATTCCTTCCTTATCTTGGATCTTTGCTTTTACATTTTCAATTGTGTCGCTTGATTCGAC 1714 Query 143137 TTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184 ||||| ||| | ||||| || || | |||||| || ||||||||||| Sbjct 1715 TTCAAGAGTTATAGTCTTACCAGTAAGTGTTTTCACAAATATTTGCAT 1762 Score = 102 bits (112), Expect = 8e-17 Identities = 161/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017 || ||||| | ||| ||||||||||| | || ||||||||||| || |||||||| | Sbjct 1308 CCGCCTCGAAGACGTAAAACTAAATGTAAAGTTGATTCTTTTTGAATATTGTAATCAGAC 1367 Query 143018 ATTGTGC-TCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 143076 | ||| | || | ||||| | |||||| || ||| | || || ||||| || || ||||| Sbjct 1368 AATGTTCGTCCA-TCTTCTAATTGTTTCCCGGCAAATATAAGTCGTTGTTGGTCTGGAGG 1426 Query 143077 TATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTAC 143136 || |||||||| || || ||| ||||| | ||| | || || | | ||| || Sbjct 1427 AATTCCTTCTTTATCTTGGATCTTTGCTTTTACATTTTCTATTGTATCACTTGATTCCAC 1486 Query 143137 TTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184 ||| | || | || || || || | ||||| || || || ||||| Sbjct 1487 TTCTAATGTAATTGTTTTACCAGTGAGAGTTTTAACAAAAATCTGCAT 1534 >seq247457 Length=2460 Score = 134 bits (148), Expect = 1e-26 Identities = 168/228 (74%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017 || || ||||| || ||||||||||| | || ||||| ||||| || |||||||| | Sbjct 1365 CCACCACGTAATCGTAAAACTAAATGTAAAGTTGATTCCTTTTGGATATTGTAATCAGAC 1306 Query 143018 ATTGTGC-TCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 143076 | ||| | || | ||||| | |||||| |||||| | || || ||||| ||||| ||||| Sbjct 1305 AATGTTCGTCCA-TCTTCTAATTGTTTCCCAGCAAAAATAAGTCGTTGTTGATCTGGAGG 1247 Query 143077 TATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTAC 143136 || ||||| || || || ||| ||||| | ||| | ||||| | | ||| || Sbjct 1246 AATTCCTTCCTTATCTTGGATCTTTGCTTTTACATTTTCAATTGTGTCGCTTGATTCGAC 1187 Query 143137 TTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184 ||||| ||| | ||||| || || | |||||| || ||||||||||| Sbjct 1186 TTCAAGAGTTATAGTCTTACCAGTAAGTGTTTTCACAAATATTTGCAT 1139 Score = 102 bits (112), Expect = 8e-17 Identities = 161/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017 || ||||| | ||| ||||||||||| | || ||||||||||| || |||||||| | Sbjct 1593 CCGCCTCGAAGACGTAAAACTAAATGTAAAGTTGATTCTTTTTGAATATTGTAATCAGAC 1534 Query 143018 ATTGTGC-TCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 143076 | ||| | || | ||||| | |||||| || ||| | || || ||||| || || ||||| Sbjct 1533 AATGTTCGTCCA-TCTTCTAATTGTTTCCCGGCAAATATAAGTCGTTGTTGGTCTGGAGG 1475 Query 143077 TATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTAC 143136 || |||||||| || || ||| ||||| | ||| | || || | | ||| || Sbjct 1474 AATTCCTTCTTTATCTTGGATCTTTGCTTTTACATTTTCTATTGTATCACTTGATTCCAC 1415 Query 143137 TTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184 ||| | || | || || || || | ||||| || || || ||||| Sbjct 1414 TTCTAATGTAATTGTTTTACCAGTGAGAGTTTTAACAAAAATCTGCAT 1367 >seq238832 Length=2299 Score = 134 bits (148), Expect = 1e-26 Identities = 168/228 (74%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017 || || ||||| || ||||||||||| | || ||||| ||||| || |||||||| | Sbjct 1204 CCACCACGTAATCGTAAAACTAAATGTAAAGTTGATTCCTTTTGGATATTGTAATCAGAC 1145 Query 143018 ATTGTGC-TCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 143076 | ||| | || | ||||| | |||||| |||||| | || || ||||| ||||| ||||| Sbjct 1144 AATGTTCGTCCA-TCTTCTAATTGTTTCCCAGCAAAAATAAGTCGTTGTTGATCTGGAGG 1086 Query 143077 TATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTAC 143136 || ||||| || || || ||| ||||| | ||| | ||||| | | ||| || Sbjct 1085 AATTCCTTCCTTATCTTGGATCTTTGCTTTTACATTTTCAATTGTGTCGCTTGATTCGAC 1026 Query 143137 TTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184 ||||| ||| | ||||| || || | |||||| || ||||||||||| Sbjct 1025 TTCAAGAGTTATAGTCTTACCAGTAAGTGTTTTCACAAATATTTGCAT 978 Score = 102 bits (112), Expect = 8e-17 Identities = 161/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017 || ||||| | ||| ||||||||||| | || ||||||||||| || |||||||| | Sbjct 1432 CCGCCTCGAAGACGTAAAACTAAATGTAAAGTTGATTCTTTTTGAATATTGTAATCAGAC 1373 Query 143018 ATTGTGC-TCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 143076 | ||| | || | ||||| | |||||| || ||| | || || ||||| || || ||||| Sbjct 1372 AATGTTCGTCCA-TCTTCTAATTGTTTCCCGGCAAATATAAGTCGTTGTTGGTCTGGAGG 1314 Query 143077 TATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTAC 143136 || |||||||| || || ||| ||||| | ||| | || || | | ||| || Sbjct 1313 AATTCCTTCTTTATCTTGGATCTTTGCTTTTACATTTTCTATTGTATCACTTGATTCCAC 1254 Query 143137 TTCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184 ||| | || | || || || || | ||||| || || || ||||| Sbjct 1253 TTCTAATGTAATTGTTTTACCAGTGAGAGTTTTAACAAAAATCTGCAT 1206 >seq504844 Length=3026 Score = 118 bits (130), Expect = 1e-21 Identities = 170/240 (71%), Gaps = 0/240 (0%) Strand=Plus/Plus Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017 ||||||||||| || ||||||||||| | || ||||||||||| || |||||||| Sbjct 1531 CCTCCTCGTAATCGTAAAACTAAATGTAAAGTTGATTCTTTTTGAATATTGTAATCAGAT 1590 Query 143018 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 143077 | ||| | ||||| | |||||| |||||| | || || ||||| ||||| || || Sbjct 1591 AATGTTCGGCCATCTTCCAATTGTTTTCCAGCAAATATAAGTCGTTGTTGATCTGGTGGA 1650 Query 143078 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACT 143137 || ||||||| || | ||| ||| | | ||| | || || | | ||| ||| Sbjct 1651 ATTCCTTCTTCATCTTGTACCTTTGCTTTGACGTTTTCTATTGTATCACTTGATTCAACT 1710 Query 143138 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCATAGCTTATGTTTTA 143197 |||| ||| | || || || || | |||||| || || |||||||| ||||||| || Sbjct 1711 TCAATAGTGATAGTTTTCCCAGTAAGTGTTTTAACAAAAATTTGCATTCTTTATGTTATA 1770 >seq627119 Length=2126 Score = 107 bits (118), Expect = 2e-18 Identities = 158/224 (71%), Gaps = 0/224 (0%) Strand=Plus/Minus Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017 || || || | ||||||||||||||| | || ||||||||||| || |||||||| | Sbjct 1207 CCACCCCGGAGACGCAAAACTAAATGTAAAGTTGATTCTTTTTGAATATTGTAATCAGAC 1148 Query 143018 ATTGTGCTCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGT 143077 | ||| || ||||| | ||||| |||||| | || || ||||| ||||| || || Sbjct 1147 AATGTTCTGCCATCTTCTAACTGTTTTCCAGCAAATATAAGTCGTTGTTGATCTGGTGGA 1088 Query 143078 ATGCCTTCTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACT 143137 || ||||| || || || || ||||| | ||| | || || | | ||| ||| Sbjct 1087 ATTCCTTCCTTATCTTGGATCTTCGCTTTTACATTTTCTATTGTATCACTTGATTCAACT 1028 Query 143138 TCAACAGTCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTG 143181 |||| ||| | || || || || | |||||| || ||||| || Sbjct 1027 TCAAGAGTGATAGTTTTCCCAGTAAGTGTTTTCACAAATATCTG 984 >seq231077 Length=1080 Score = 104 bits (114), Expect = 2e-17 Identities = 156/220 (71%), Gaps = 4/220 (2%) Strand=Plus/Minus Query 142967 AAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTCATTGTGCTC 143026 || || || || ||||| | || ||||||||||| || || ||||| | ||| || Sbjct 588 AATCGTAACACCAAATGTAAAGTTGATTCTTTTTGAATATTATAATCAGGTAATGT--TC 531 Query 143027 GA--GTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGGTATGCCTT 143084 || ||||| | |||||| ||||| | || || ||||| ||||| | ||| || |||| Sbjct 530 GACCATCTTCCAATTGTTTCCCAGCGAAAATAAGTCGTTGTTGATCAGAAGGAATTCCTT 471 Query 143085 CTTTGTCGGTAATTTTTTGTTTTAGCTGTTCCACCGTGTCCGTGGGTTCTACTTCAACAG 143144 |||| || |||||| ||||| | ||| | || || | | ||| ||||| | || Sbjct 470 CTTTATCTTCGATTTTTGCTTTTACATTTTCAATAGTATCACTTGCTTCAACTTCTAAAG 411 Query 143145 TCACCGTCTTGCCGGTCAATGTTTTTACGAATATTTGCAT 143184 | | |||||||| || |||||||| || || |||| ||| Sbjct 410 TGATAGTCTTGCCAGTTAATGTTTTCACAAAAATTTCCAT 371 >seq22558 Length=224 Score = 96.9 bits (106), Expect = 3e-15 Identities = 114/152 (75%), Gaps = 2/152 (1%) Strand=Plus/Minus Query 142958 CCTCCTCGTAAACGCAAAACTAAATGAATTGTAGATTCTTTTTGTATGTTGTAATCGCTC 143017 || || ||||| || ||||| ||||| | || ||||| ||||| || |||||||| | Sbjct 152 CCACCACGTAATCGTAAAACCAAATGTAAAGTTGATTCCTTTTGGATATTGTAATCAGAC 93 Query 143018 ATTGTGC-TCGAGTCTTCGAGTTGTTTACCAGCATAGATCAGACGTTGCTGATCGGGAGG 143076 | ||| | || | ||||| | |||||| ||||| | || || ||||||||||| ||||| Sbjct 92 AATGTTCGTCCA-TCTTCTAATTGTTTCCCAGCGAAAATAAGTCGTTGCTGATCAGGAGG 34 Query 143077 TATGCCTTCTTTGTCGGTAATTTTTTGTTTTA 143108 || |||||||| || |||||| ||||| Sbjct 33 AATTCCTTCTTTATCTTGGATTTTTGCTTTTA 2 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 502903818778080