Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dugesia_20japonica_20[genbank_20GCA_5F001938525.1_202017-01-06] 648,594 sequences; 854,187,087 total letters Query= NC_005137.2 Length=131160 Score E Sequences producing significant alignments: (Bits) Value seq231077 107 2e-18 seq504844 96.9 3e-15 seq279238 95.1 1e-14 seq529312 87.8 1e-12 seq375912 82.4 6e-11 seq247457 82.4 6e-11 seq238832 82.4 6e-11 >seq231077 Length=1080 Score = 107 bits (118), Expect = 2e-18 Identities = 151/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 19997 AACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCCATAGTTTTAGAATCT 20056 ||||||||||||| || ||||||||||| || || ||||| | ||| | |||| Sbjct 582 AACACCAAATGTAAAGTTGATTCTTTTTGAATATTATAATCAGGTAATGTTCGACCATCT 523 Query 20057 TCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGCACGCCTTCTTTGTCG 20116 ||||||||||| || || ||||||| | |||||||| || | |||||||| || Sbjct 522 TCCAATTGTTTCCCAGCGAAAATAAGTCGTTGTTGATCAGAAGGAATTCCTTCTTTATCT 463 Query 20117 GCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTTTCCACGGTAATGGTT 20176 | |||||| ||| || | ||| || ||| | | ||| ||| | || || || Sbjct 462 TCGATTTTTGCTTTTACATTTTCAATAGTATCACTTGCTTCAACTTCTAAAGTGATAGTC 403 Query 20177 TTGCCGGTCAACGTTTTGACAAAAATTTGCAT 20208 ||||| || || ||||| |||||||||| ||| Sbjct 402 TTGCCAGTTAATGTTTTCACAAAAATTTCCAT 371 >seq504844 Length=3026 Score = 96.9 bits (106), Expect = 3e-15 Identities = 172/248 (69%), Gaps = 6/248 (2%) Strand=Plus/Plus Query 19981 TCCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCC 20040 |||||||||||| | || || ||||||| || ||||||||||| || ||||||| | Sbjct 1530 TCCTCCTCGTAATCGTAAAACTAAATGTAAAGTTGATTCTTTTTGAATATTGTAAT--CA 1587 Query 20041 CATAGTTTTAG--AATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACG 20098 ||| | || | ||||||||||||||| || ||| | ||||| | |||||||| Sbjct 1588 GATAATGTTCGGCCATCTTCCAATTGTTTTCCAGCAAATATAAGTCGTTGTTGATCTGGT 1647 Query 20099 GGCACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCC 20158 || | ||||||| || | ||| ||| || | | | | ||| | | ||| Sbjct 1648 GGAATTCCTTCTTCATCTTGTACCTTTGCTTTGACGTTTTCTATTGTATCACTTGATTCA 1707 Query 20159 GTTTCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAAATTTGCATTTTTAAACTC 20218 ||| | || || ||||| || || | ||||| ||||||||||||||| || | | Sbjct 1708 ACTTCAATAGTGATAGTTTTCCCAGTAAGTGTTTTAACAAAAATTTGCATTCTTTA--TG 1765 Query 20219 TTATAAAT 20226 |||||||| Sbjct 1766 TTATAAAT 1773 >seq279238 Length=1756 Score = 95.1 bits (104), Expect = 1e-14 Identities = 172/251 (69%), Gaps = 2/251 (1%) Strand=Plus/Minus Query 19982 CCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCC 20041 || |||| ||| | || |||||||| | || ||||| ||||| ||||| ||||| | Sbjct 1407 CCACCTCTTAAACGTAAGACCAAATGCAAAGTTGATTCCTTTTGAATGTTATAATCAGAC 1348 Query 20042 ATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGC 20101 | |||| || |||||||||||| || || ||| | || | || || ||||| || Sbjct 1347 AAAGTTCTACCATCTTCCAATTGCTTACCAGCAAATATCAATCTTTGCTGATCTGGAGGA 1288 Query 20102 ACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTT 20161 | ||||| || || |||||| ||| || | | | |||||| | ||| | Sbjct 1287 ATACCTTCCTTATCTTGAATTTTAGATTTAACATTTTCGATAGAATCAGATGATTCGACT 1228 Query 20162 TCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAAATTTGCATTTTTAAACTCTTA 20221 || | || || ||||| || || || ||||| ||||| || ||||| || ||| ||| Sbjct 1227 TCTAATGTTATAGTTTTTCCTGTTAATGTTTTAACAAATATCTGCATCTTAAAA--ATTA 1170 Query 20222 TAAATGACAAA 20232 || |||| ||| Sbjct 1169 TATATGAAAAA 1159 >seq529312 Length=2362 Score = 87.8 bits (96), Expect = 1e-12 Identities = 157/230 (68%), Gaps = 3/230 (1%) Strand=Plus/Minus Query 20000 ACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCCATAGTTTTAGAATCTTCC 20059 || ||||||||||| ||||| ||||| || ||||| || | ||| | |||||| Sbjct 1886 ACTAAATGTAGTGTTGATTCCTTTTGAATATTGTAGTCTGATAAAGTGCGACCATCTTCA 1827 Query 20060 AATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGCACGCCTTCTTTGTCGGCA 20119 | ||| || || ||| ||||||| | |||||||| || | | |||||| || | Sbjct 1826 AGTTGCTTACCAGCAAAAATAAGTCGTTGTTGATCAGGTGGAAYTCYTTCTTTATCTTGA 1767 Query 20120 ATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTTTCCACGGTAATGGTTTTG 20179 || ||| ||| || | ||| || || || || ||| | || || || || Sbjct 1766 ATCTTTGCTTTAACATTTTCAATAGTGTCAGAAGACTCAACTTCTAACGTTATAGTCTTT 1707 Query 20180 CCGGTCAACGTTTTGACAAAAATTTGCATTTTTAA---ACTCTTATAAAT 20226 || || | ||||| |||||||||||||||||||| || ||| ||||| Sbjct 1706 CCAGTTAGTGTTTTAACAAAAATTTGCATTTTTAAAAGACACTTTTAAAT 1657 >seq375912 Length=2531 Score = 82.4 bits (90), Expect = 6e-11 Identities = 146/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 19997 AACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCCATAGTTTTAGAATCT 20056 || || ||||||| || ||||||||||| || |||||||| || ||| |||| Sbjct 1323 AAAACTAAATGTAAAGTTGATTCTTTTTGAATATTGTAATCAGACAATGTTCGTCCATCT 1382 Query 20057 TCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGCACGCCTTCTTTGTCG 20116 || |||||||| || ||| | ||||| | ||||| || || | |||||||| || Sbjct 1383 TCTAATTGTTTCCCGGCAAATATAAGTCGTTGTTGGTCTGGAGGAATTCCTTCTTTATCT 1442 Query 20117 GCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTTTCCACGGTAATGGTT 20176 || ||| ||| || | | | | ||| | | |||| ||| | ||||| ||| Sbjct 1443 TGGATCTTTGCTTTTACATTTTCTATTGTATCACTTGATTCCACTTCTAATGTAATTGTT 1502 Query 20177 TTGCCGGTCAACGTTTTGACAAAAATTTGCATT 20209 || || || | ||||| |||||||| |||||| Sbjct 1503 TTACCAGTGAGAGTTTTAACAAAAATCTGCATT 1535 >seq247457 Length=2460 Score = 82.4 bits (90), Expect = 6e-11 Identities = 146/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 19997 AACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCCATAGTTTTAGAATCT 20056 || || ||||||| || ||||||||||| || |||||||| || ||| |||| Sbjct 1578 AAAACTAAATGTAAAGTTGATTCTTTTTGAATATTGTAATCAGACAATGTTCGTCCATCT 1519 Query 20057 TCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGCACGCCTTCTTTGTCG 20116 || |||||||| || ||| | ||||| | ||||| || || | |||||||| || Sbjct 1518 TCTAATTGTTTCCCGGCAAATATAAGTCGTTGTTGGTCTGGAGGAATTCCTTCTTTATCT 1459 Query 20117 GCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTTTCCACGGTAATGGTT 20176 || ||| ||| || | | | | ||| | | |||| ||| | ||||| ||| Sbjct 1458 TGGATCTTTGCTTTTACATTTTCTATTGTATCACTTGATTCCACTTCTAATGTAATTGTT 1399 Query 20177 TTGCCGGTCAACGTTTTGACAAAAATTTGCATT 20209 || || || | ||||| |||||||| |||||| Sbjct 1398 TTACCAGTGAGAGTTTTAACAAAAATCTGCATT 1366 >seq238832 Length=2299 Score = 82.4 bits (90), Expect = 6e-11 Identities = 146/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 19997 AACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCCATAGTTTTAGAATCT 20056 || || ||||||| || ||||||||||| || |||||||| || ||| |||| Sbjct 1417 AAAACTAAATGTAAAGTTGATTCTTTTTGAATATTGTAATCAGACAATGTTCGTCCATCT 1358 Query 20057 TCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGCACGCCTTCTTTGTCG 20116 || |||||||| || ||| | ||||| | ||||| || || | |||||||| || Sbjct 1357 TCTAATTGTTTCCCGGCAAATATAAGTCGTTGTTGGTCTGGAGGAATTCCTTCTTTATCT 1298 Query 20117 GCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTTTCCACGGTAATGGTT 20176 || ||| ||| || | | | | ||| | | |||| ||| | ||||| ||| Sbjct 1297 TGGATCTTTGCTTTTACATTTTCTATTGTATCACTTGATTCCACTTCTAATGTAATTGTT 1238 Query 20177 TTGCCGGTCAACGTTTTGACAAAAATTTGCATT 20209 || || || | ||||| |||||||| |||||| Sbjct 1237 TTACCAGTGAGAGTTTTAACAAAAATCTGCATT 1205 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 416270472538914