Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dugesia_20japonica_20[genbank_20GCA_5F001938525.1_202017-01-06] 648,594 sequences; 854,187,087 total letters Query= NC_005179.1 Length=134721 Score E Sequences producing significant alignments: (Bits) Value seq610803 161 8e-35 seq623066 150 2e-31 seq629926 140 3e-28 seq105517 105 6e-18 >seq610803 Length=1907 Score = 161 bits (178), Expect = 8e-35 Identities = 210/288 (73%), Gaps = 2/288 (1%) Strand=Plus/Minus Query 13421 ATATAAGTATCTATCAATAAGCTATACATTTCTGAATGAATATTTTCCATCGCTATTTGG 13480 ||||| | ||| || |||||| ||||||||||| ||||| ||||| || || ||||| Sbjct 948 ATATATGAATCGATTAATAAGGAGTACATTTCTGAGTGAATGTTTTCAATGGCAATTTGA 889 Query 13481 AAACCATAAAAACATCTAGCCTCTGATACCTGAACTTCG-GAGTAAAATCTTTCTGCTAA 13539 |||| |||||| | || || | | || |||||| || |||| | ||| | | Sbjct 888 AAACTATAAAATGCTTCGGCTTCGGGAATCTTAACTTCTTGAATAAAC-CGTTCCACGAG 830 Query 13540 GTTTTCGTTAACTATCCCGTCACTAGCAGCaaaaaaaGCAAGTATGTGCTTAATAAAttt 13599 |||||||| ||||| || |||||||| |||||||| ||||| | ||| |||||| | Sbjct 829 ATTTTCGTTTACTATTCCATCACTAGCTGCAAAAAACGCAAGAACATGCGAAATAAAATA 770 Query 13600 tttttCGTTTTCTGACAACTTTAACCAATCTGGAAAATCTTTTGATAAATCTACCTCCTC 13659 ||| ||||||| |||||| ||||| | |||||||||||||||||| || || | Sbjct 769 ACGTTCATTTTCTGTTAACTTTTTCCAATGAGCAAAATCTTTTGATAAATCAACTTCATT 710 Query 13660 AACGGTCCAAAAAGAAGCAACAGCCTTCTTATACATCATCCATATATC 13707 || |||||||| || | |||||| ||| |||| ||| ||||| Sbjct 709 TACCGTCCAAAACGATGATCTAGCCTTGTTAAACATATCCCAAATATC 662 Score = 111 bits (122), Expect = 1e-19 Identities = 121/161 (75%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 13133 AGATGCTTAAACATCATACATGCAAAATCACAGTGCAATCCTTCATCTCTACTTATTAGC 13192 |||| |||||||||| ||| ||||||||||| || | ||||||||||| || |||| Sbjct 1282 AGATATTTAAACATCAAACAGGCAAAATCACAATGAAGACCTTCATCTCTGCTAATTAAT 1223 Query 13193 TCGTTTGAAAATGTTAGACCCGGCATAAGCCCTCGTTTTTTAATCCAAAATATAGCAGCA 13252 ||||| ||| | | |||||||| | || |||||||| | ||||||||| | ||| Sbjct 1222 TCGTTGCTAAACGACAATCCCGGCATCAATCCACGTTTTTTTAACCAAAATATTGATGCA 1163 Query 13253 AACGAACCCGaaaaaaaTATTCCTTCAACTGCTGCAAACGC 13293 || || ||||||||| |||||||| ||||| || || Sbjct 1162 AAACTTCCACTAAAAAATATCCCTTCAACGGCTGCGAAAGC 1122 >seq623066 Length=2774 Score = 150 bits (166), Expect = 2e-31 Identities = 217/301 (72%), Gaps = 4/301 (1%) Strand=Plus/Minus Query 13409 TTACTGTCTAAAATATAAGTATCTATCAATAAGCTATACATTTCTGAATGAATATTTTCC 13468 ||||| ||| ||||| | || || |||||| ||||||||||| ||||| ||||| Sbjct 1286 TTACTATCTGTGATATATGAGTCGATTAATAAGGAGTACATTTCTGAGTGAATGTTTTCA 1227 Query 13469 ATCGCTATTTGGAAACCATAAAA-ACATCTAGCCTCTGATACCTGAACTTCG-GAGTAAA 13526 | || ||||| |||| |||||| || || || || | | || |||||| || |||| Sbjct 1226 TTAGCAATTTGAAAACTATAAAATACTTCG-GCTTCAGGAATCTAAACTTCTTGAATAAA 1168 Query 13527 ATCTTTCTGCTAAGTTTTCGTTAACTATCCCGTCACTAGCAGCaaaaaaaGCAAGTATGT 13586 || | | | |||||||| ||||| || ||||||| |||||||| ||||| | | Sbjct 1167 CCATTCCAGGAGA-TTTTCGTTTACTATTCCATCACTAGATGCAAAAAACGCAAGAACAT 1109 Query 13587 GCTTAATAAAttttttttCGTTTTCTGACAACTTTAACCAATCTGGAAAATCTTTTGATA 13646 || |||||||| ||| ||||||| |||||| ||||| | |||||||||||||| Sbjct 1108 GCGAAATAAATTAACGTTCATTTTCTGTAAACTTTTTCCAATGAGCAAAATCTTTTGATA 1049 Query 13647 AATCTACCTCCTCAACGGTCCAAAAAGAAGCAACAGCCTTCTTATACATCATCCATATAT 13706 |||| || | | || |||||||| || | |||||| ||| |||| ||| |||| Sbjct 1048 AATCGACTCCATTTACCGTCCAAAACGATGATCTAGCCTTGTTAAACATTTCCCAAATAT 989 Query 13707 C 13707 | Sbjct 988 C 988 Score = 102 bits (112), Expect = 7e-17 Identities = 119/161 (74%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 13133 AGATGCTTAAACATCATACATGCAAAATCACAGTGCAATCCTTCATCTCTACTTATTAGC 13192 |||| |||||||||| ||| ||||||||||| || | ||||||||||| || |||| Sbjct 1606 AGATATTTAAACATCAAACAGGCAAAATCACAATGAAGACCTTCATCTCTGCTAATTAAT 1547 Query 13193 TCGTTTGAAAATGTTAGACCCGGCATAAGCCCTCGTTTTTTAATCCAAAATATAGCAGCA 13252 ||||| ||||| | |||||||| | || |||||||| | |||||| || ||| Sbjct 1546 TCGTTGCTAAATGACAATCCCGGCATCAATCCACGTTTTTTTAACCAAAACATTAATGCA 1487 Query 13253 AACGAACCCGaaaaaaaTATTCCTTCAACTGCTGCAAACGC 13293 || || ||||||||| |||||||| |||| || || Sbjct 1486 AAACTTCCACTAAAAAATATCCCTTCAACAACTGCGAAAGC 1446 >seq629926 Length=3335 Score = 140 bits (154), Expect = 3e-28 Identities = 211/300 (70%), Gaps = 0/300 (0%) Strand=Plus/Minus Query 13420 AATATAAGTATCTATCAATAAGCTATACATTTCTGAATGAATATTTTCCATCGCTATTTG 13479 ||| || | ||| || |||| ||||||||| ||||||||||| || || || ||||| Sbjct 2353 AATGTAGGAATCAATTAATACAGAATACATTTCCGAATGAATATTCTCAATAGCAATTTG 2294 Query 13480 GAAACCATAAAAACATCTAGCCTCTGATACCTGAACTTCGGAGTAAAATCTTTCTGCTAA 13539 |||| ||||| | ||| || | | | || ||| | ||||||| || | | Sbjct 2293 AAAACTGTAAAATGCTTCAGCTTCAGGAATTTTAATTTCTTGGATAAATCTTCCTACAAG 2234 Query 13540 GTTTTCGTTAACTATCCCGTCACTAGCAGCaaaaaaaGCAAGTATGTGCTTAATAAAttt 13599 ||||| || ||||| || |||||||| |||||||| | || | ||| |||||| | Sbjct 2233 ATTTTCATTCACTATTCCATCACTAGCTGCAAAAAACGAGAGAACGTGTGAAATAAAATA 2174 Query 13600 tttttCGTTTTCTGACAACTTTAACCAATCTGGAAAATCTTTTGATAAATCTACCTCCTC 13659 | ||| ||||||| ||| || |||||| | ||||||||| |||||||| || || | Sbjct 2173 TCGTTCATTTTCTGTCAAGTTATTCCAATCAGCAAAATCTTTGGATAAATCAACTTCATT 2114 Query 13660 AACGGTCCAAAAAGAAGCAACAGCCTTCTTATACATCATCCATATATCCTTATAAACAAT 13719 || | |||||| |||| |||||| ||| |||| ||| || || ||| | |||| Sbjct 2113 TACAGACCAAAATGAAGATCTAGCCTTATTAAACATATCCCAAATGTCATTAAATTCAAT 2054 Score = 105 bits (116), Expect = 6e-18 Identities = 120/161 (75%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 13133 AGATGCTTAAACATCATACATGCAAAATCACAGTGCAATCCTTCATCTCTACTTATTAGC 13192 |||| |||||||||| ||| ||||||||||| || | ||||||||||| || || | Sbjct 2690 AGATATTTAAACATCAAACAGGCAAAATCACAATGAAGACCTTCATCTCTGCTAATCAAT 2631 Query 13193 TCGTTTGAAAATGTTAGACCCGGCATAAGCCCTCGTTTTTTAATCCAAAATATAGCAGCA 13252 ||||| ||| | || |||||||| | || |||||||| | ||||||||| | ||| Sbjct 2630 TCGTTACTAAAAGATAATCCCGGCATCAATCCACGTTTTTTCAACCAAAATATTGACGCA 2571 Query 13253 AACGAACCCGaaaaaaaTATTCCTTCAACTGCTGCAAACGC 13293 || || |||||||| |||||||| || ||||| || Sbjct 2570 AAACTTCCACTGAAAAATATCCCTTCAACAGCAGCAAAAGC 2530 >seq105517 Length=321 Score = 105 bits (116), Expect = 6e-18 Identities = 120/161 (75%), Gaps = 0/161 (0%) Strand=Plus/Minus Query 13133 AGATGCTTAAACATCATACATGCAAAATCACAGTGCAATCCTTCATCTCTACTTATTAGC 13192 |||| |||||||||| ||| ||||||||||| || | |||||||||||||| |||| Sbjct 318 AGATATTTAAACATCAAACAGGCAAAATCACAATGAAGACCTTCATCTCTACTAATTAAT 259 Query 13193 TCGTTTGAAAATGTTAGACCCGGCATAAGCCCTCGTTTTTTAATCCAAAATATAGCAGCA 13252 ||||| ||| | | |||||||| | || |||||||| | |||||| || ||| Sbjct 258 TCGTTGCTAAAAGACAATCCCGGCATCAATCCACGTTTTTTTAACCAAAAAATTAATGCA 199 Query 13253 AACGAACCCGaaaaaaaTATTCCTTCAACTGCTGCAAACGC 13293 || || ||||||||| |||||||| ||||| || || Sbjct 198 AAACTTCCACTAAAAAATATCCCTTCAACAGCTGCGAAAGC 158 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427575596452788