Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dugesia_20japonica_20[genbank_20GCA_5F001938525.1_202017-01-06] 648,594 sequences; 854,187,087 total letters Query= NC_006549.1 Length=140131 Score E Sequences producing significant alignments: (Bits) Value seq279238 141 8e-29 seq600562 114 1e-20 seq375912 105 6e-18 seq247457 105 6e-18 seq238832 105 6e-18 seq627119 102 7e-17 seq231077 100 3e-16 seq628701 95.1 1e-14 seq22558 82.4 7e-11 >seq279238 Length=1756 Score = 141 bits (156), Expect = 8e-29 Identities = 173/235 (74%), Gaps = 1/235 (0%) Strand=Plus/Minus Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840 || ||||| || || || ||||| |||||||| ||||||||||| | ||||||||| | Sbjct 1407 CCACCTCTTAAACGTAAGACCAAATGCAAAGTTGATTCCTTTTGAATGTTATAATCAGAC 1348 Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900 | ||| | ||| |||| || || || |||| || ||||||||||||||||||||| Sbjct 1347 AAAGTTCTACCATCTTCCAATTGCTTACCAGCAAATATCAATCTTTGCTGATCTGGAGGA 1288 Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960 |||||||| || || | |||||| | || || ||| || |||| ||||| Sbjct 1287 ATACCTTCCTTATCTTGAATTTTAGATTTAACATTTTCGATAGAATCAGATGATTCGACT 1228 Query 94961 TCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCATGCTTACAA 95015 || | || || |||||||| || | ||||| ||||| |||||||| |||| || Sbjct 1227 TCTAATGTTATAGTTTTTCCTGTTAATGTTTTAACAAATATCTGCAT-CTTAAAA 1174 >seq600562 Length=4425 Score = 114 bits (126), Expect = 1e-20 Identities = 114/145 (79%), Gaps = 2/145 (1%) Strand=Plus/Minus Query 94872 CAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGA 94931 |||| || |||| |||||||||||||||||||||||||||||| | |||||||| |||| Sbjct 4421 CAAAAATCAATCGTTGCTGATCTGGAGGAATACCTTCTTTGTCCTGGATTTTTGCTTTGA 4362 Query 94932 CGGCGCCGACAGTGTCAGCGTG-GTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTT 94990 | | | ||| || || || || || || | || |||||||||||||| |||||| Sbjct 4361 CATTTTCAATAGTATC-GCTTGATTCCACCTCCAATGTAATGGTTTTTCCAGTTAGAGTT 4303 Query 94991 TTCACAAAGATCTGCATGCTTACAA 95015 || ||||| |||||||| ||| || Sbjct 4302 TTGACAAATATCTGCATCTTTAAAA 4278 >seq375912 Length=2531 Score = 105 bits (116), Expect = 6e-18 Identities = 172/243 (71%), Gaps = 6/243 (2%) Strand=Plus/Plus Query 94768 AAAATTTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCAC 94827 |||| | | || ||| || | ||||| || || || || ||||| ||||||||||| | Sbjct 1523 AAAAATCTGCATTCCACCACGTAATCGTAAAACTAAATGTAAAGTTGATTCCTTTTGGAT 1582 Query 94828 GTTATAATCGCTCATAGTGTTGGA--ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTT 94885 || ||||| || |||| | ||| || | ||||| || |||| || | || | Sbjct 1583 ATTGTAATCAGACAA--TGTTCGTCCATCTTCTAATTGTTTCCCAGCAAAAATAAGTCGT 1640 Query 94886 TGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTG 94945 || |||||||||||||| ||||| || || | || ||||| || || | | ||| Sbjct 1641 TGTTGATCTGGAGGAATTCCTTCCTTATCTTGGATCTTTGCTTTTACATTTTCAATTGTG 1700 Query 94946 TCAGCGTG-GTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTG 95004 || || || ||||| |||| || || || || |||||||| ||||||||||| || || Sbjct 1701 TC-GCTTGATTCGACTTCAAGAGTTATAGTCTTACCAGTAAGTGTTTTCACAAATATTTG 1759 Query 95005 CAT 95007 ||| Sbjct 1760 CAT 1762 Score = 87.8 bits (96), Expect = 2e-12 Identities = 153/218 (70%), Gaps = 6/218 (3%) Strand=Plus/Plus Query 94793 CGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGA- 94851 || || || || || ||||| ||||| ||||| | || ||||| || |||| | Sbjct 1320 CGTAAAACTAAATGTAAAGTTGATTCTTTTTGAATATTGTAATCAGACAA--TGTTCGTC 1377 Query 94852 -ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTT 94910 ||| || | ||||| ||| |||| || | || ||| || ||||||||||| ||||||| Sbjct 1378 CATCTTCTAATTGTTTCCCGGCAAATATAAGTCGTTGTTGGTCTGGAGGAATTCCTTCTT 1437 Query 94911 TGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTG-GTCGACGTCAATCGTG 94969 | || | || ||||| || || | | || ||| | || || || || | || Sbjct 1438 TATCTTGGATCTTTGCTTTTACATTTTCTATTGTATCA-CTTGATTCCACTTCTAATGTA 1496 Query 94970 ATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || ||||| ||||| |||||||| ||||| |||||||| Sbjct 1497 ATTGTTTTACCAGTGAGAGTTTTAACAAAAATCTGCAT 1534 >seq247457 Length=2460 Score = 105 bits (116), Expect = 6e-18 Identities = 172/243 (71%), Gaps = 6/243 (2%) Strand=Plus/Minus Query 94768 AAAATTTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCAC 94827 |||| | | || ||| || | ||||| || || || || ||||| ||||||||||| | Sbjct 1378 AAAAATCTGCATTCCACCACGTAATCGTAAAACTAAATGTAAAGTTGATTCCTTTTGGAT 1319 Query 94828 GTTATAATCGCTCATAGTGTTGGA--ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTT 94885 || ||||| || |||| | ||| || | ||||| || |||| || | || | Sbjct 1318 ATTGTAATCAGACAA--TGTTCGTCCATCTTCTAATTGTTTCCCAGCAAAAATAAGTCGT 1261 Query 94886 TGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTG 94945 || |||||||||||||| ||||| || || | || ||||| || || | | ||| Sbjct 1260 TGTTGATCTGGAGGAATTCCTTCCTTATCTTGGATCTTTGCTTTTACATTTTCAATTGTG 1201 Query 94946 TCAGCGTG-GTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTG 95004 || || || ||||| |||| || || || || |||||||| ||||||||||| || || Sbjct 1200 TC-GCTTGATTCGACTTCAAGAGTTATAGTCTTACCAGTAAGTGTTTTCACAAATATTTG 1142 Query 95005 CAT 95007 ||| Sbjct 1141 CAT 1139 Score = 87.8 bits (96), Expect = 2e-12 Identities = 153/218 (70%), Gaps = 6/218 (3%) Strand=Plus/Minus Query 94793 CGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGA- 94851 || || || || || ||||| ||||| ||||| | || ||||| || |||| | Sbjct 1581 CGTAAAACTAAATGTAAAGTTGATTCTTTTTGAATATTGTAATCAGACAA--TGTTCGTC 1524 Query 94852 -ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTT 94910 ||| || | ||||| ||| |||| || | || ||| || ||||||||||| ||||||| Sbjct 1523 CATCTTCTAATTGTTTCCCGGCAAATATAAGTCGTTGTTGGTCTGGAGGAATTCCTTCTT 1464 Query 94911 TGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTG-GTCGACGTCAATCGTG 94969 | || | || ||||| || || | | || ||| | || || || || | || Sbjct 1463 TATCTTGGATCTTTGCTTTTACATTTTCTATTGTATCA-CTTGATTCCACTTCTAATGTA 1405 Query 94970 ATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || ||||| ||||| |||||||| ||||| |||||||| Sbjct 1404 ATTGTTTTACCAGTGAGAGTTTTAACAAAAATCTGCAT 1367 >seq238832 Length=2299 Score = 105 bits (116), Expect = 6e-18 Identities = 172/243 (71%), Gaps = 6/243 (2%) Strand=Plus/Minus Query 94768 AAAATTTTACACTCCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCAC 94827 |||| | | || ||| || | ||||| || || || || ||||| ||||||||||| | Sbjct 1217 AAAAATCTGCATTCCACCACGTAATCGTAAAACTAAATGTAAAGTTGATTCCTTTTGGAT 1158 Query 94828 GTTATAATCGCTCATAGTGTTGGA--ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTT 94885 || ||||| || |||| | ||| || | ||||| || |||| || | || | Sbjct 1157 ATTGTAATCAGACAA--TGTTCGTCCATCTTCTAATTGTTTCCCAGCAAAAATAAGTCGT 1100 Query 94886 TGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTG 94945 || |||||||||||||| ||||| || || | || ||||| || || | | ||| Sbjct 1099 TGTTGATCTGGAGGAATTCCTTCCTTATCTTGGATCTTTGCTTTTACATTTTCAATTGTG 1040 Query 94946 TCAGCGTG-GTCGACGTCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTG 95004 || || || ||||| |||| || || || || |||||||| ||||||||||| || || Sbjct 1039 TC-GCTTGATTCGACTTCAAGAGTTATAGTCTTACCAGTAAGTGTTTTCACAAATATTTG 981 Query 95005 CAT 95007 ||| Sbjct 980 CAT 978 Score = 87.8 bits (96), Expect = 2e-12 Identities = 153/218 (70%), Gaps = 6/218 (3%) Strand=Plus/Minus Query 94793 CGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGA- 94851 || || || || || ||||| ||||| ||||| | || ||||| || |||| | Sbjct 1420 CGTAAAACTAAATGTAAAGTTGATTCTTTTTGAATATTGTAATCAGACAA--TGTTCGTC 1363 Query 94852 -ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTT 94910 ||| || | ||||| ||| |||| || | || ||| || ||||||||||| ||||||| Sbjct 1362 CATCTTCTAATTGTTTCCCGGCAAATATAAGTCGTTGTTGGTCTGGAGGAATTCCTTCTT 1303 Query 94911 TGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTG-GTCGACGTCAATCGTG 94969 | || | || ||||| || || | | || ||| | || || || || | || Sbjct 1302 TATCTTGGATCTTTGCTTTTACATTTTCTATTGTATCA-CTTGATTCCACTTCTAATGTA 1244 Query 94970 ATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 || ||||| ||||| |||||||| ||||| |||||||| Sbjct 1243 ATTGTTTTACCAGTGAGAGTTTTAACAAAAATCTGCAT 1206 >seq627119 Length=2126 Score = 102 bits (112), Expect = 7e-17 Identities = 152/213 (71%), Gaps = 2/213 (1%) Strand=Plus/Minus Query 94793 CGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGGAA 94852 ||||| || || || ||||| ||||| ||||| | || ||||| || || || | Sbjct 1195 CGCAAAACTAAATGTAAAGTTGATTCTTTTTGAATATTGTAATCAGACAATGTTCTGCCA 1136 Query 94853 TCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTG 94912 || || | ||||||||| |||| || | || ||| |||||||| ||||| ||||| || Sbjct 1135 TCTTCTAACTGTTTTCCAGCAAATATAAGTCGTTGTTGATCTGGTGGAATTCCTTCCTTA 1076 Query 94913 TCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGT-CGACGTCAATCGTGAT 94971 || | || || || || || | | || ||| | || | | || |||| ||||| Sbjct 1075 TCTTGGATCTTCGCTTTTACATTTTCTATTGTATCA-CTTGATTCAACTTCAAGAGTGAT 1017 Query 94972 GGTTTTTCCAGTAAGAGTTTTCACAAAGATCTG 95004 ||||| |||||||| ||||||||||| ||||| Sbjct 1016 AGTTTTCCCAGTAAGTGTTTTCACAAATATCTG 984 >seq231077 Length=1080 Score = 100 bits (110), Expect = 3e-16 Identities = 158/222 (71%), Gaps = 6/222 (3%) Strand=Plus/Minus Query 94789 CAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTT 94848 |||||| |||||||| || ||||| ||||| ||||| | |||||||| || |||| Sbjct 589 CAATCGTAACACCAAATGTAAAGTTGATTCTTTTTGAATATTATAATCAGG--TAATGTT 532 Query 94849 GGA--ATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCT 94906 || ||| |||| ||||| || | || || | || ||| ||||| | |||||| ||| Sbjct 531 CGACCATCTTCCAATTGTTTCCCAGCGAAAATAAGTCGTTGTTGATCAGAAGGAATTCCT 472 Query 94907 TCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGT-CGACGTCAAT 94965 ||||| || | |||||||| || || | | ||| ||| | || | | || || | Sbjct 471 TCTTTATCTTCGATTTTTGCTTTTACATTTTCAATAGTATCA-CTTGCTTCAACTTCTAA 413 Query 94966 CGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCAT 95007 ||||| || || ||||| | ||||||||||| || | ||| Sbjct 412 AGTGATAGTCTTGCCAGTTAATGTTTTCACAAAAATTTCCAT 371 >seq628701 Length=3193 Score = 95.1 bits (104), Expect = 1e-14 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 94781 CCTCCTCTCAATCGCAACACCAAGTGCAAAGTAGATTCCTTTTGCACGTTATAATCGCTC 94840 || ||||| | || | ||||| || | ||| ||||||||| | |||||||| Sbjct 1345 CCACCTCTAAGTCTAAGAACCAAATGAAGAGTGCTTTCCTTTTGAATATTATAATCAGAT 1404 Query 94841 ATAGTGTTGGAATCCTCCAGCTGTTTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGA 94900 | ||| || ||| || | || ||||| | ||||| | | ||| |||||||||||| Sbjct 1405 AAAGTTCTGCCATCTTCTAATTGCTTTCCAGCGAAGATAAGACGTTGTTGATCTGGAGGA 1464 Query 94901 ATACCTTCTTTGTCATAAATTTTTGCCTTGACGGCGCCGACAGTGTCAGCGTGGTCGACG 94960 ||||| |||||||| | ||||||||||| || | | |||||| | || || Sbjct 1465 ATACCCTCTTTGTCTTGGATTTTTGCCTTAACATTTTCAATAGTGTCCGAAGATTCTACC 1524 Query 94961 TCAATCGTGATGGTTTTTCCAGTAAGAGTTTTCACAAAGATCTGCATGCT 95010 || | || || ||||| || || || ||||| ||||| || ||||| || Sbjct 1525 TCTAAGGTAATTGTTTTACCCGTGAGGGTTTTAACAAAAATTTGCATTCT 1574 >seq22558 Length=224 Score = 82.4 bits (90), Expect = 7e-11 Identities = 133/188 (71%), Gaps = 5/188 (3%) Strand=Plus/Minus Query 94748 TTTATCGCTAACGGTTTTTTAAAATTT-TACACTCCTCCTCTCAATCGCAACACCAAGTG 94806 |||| | ||| ||||| |||| | | || ||| || | ||||| || ||||| || Sbjct 186 TTTACCTGTAAGTGTTTTCACAAATATCTGCATTCCACCACGTAATCGTAAAACCAAATG 127 Query 94807 CAAAGTAGATTCCTTTTGCACGTTATAATCGCTCATAGTGTTGG--AATCCTCCAGCTGT 94864 ||||| ||||||||||| | || |||| | | | |||| | ||| || | ||| Sbjct 126 TAAAGTTGATTCCTTTTGGATATTGTAAT--CAGACAATGTTCGTCCATCTTCTAATTGT 69 Query 94865 TTTCCGCCAAAGATTAATCTTTGCTGATCTGGAGGAATACCTTCTTTGTCATAAATTTTT 94924 || || | || || | || ||||||||| |||||||| |||||||| || | |||||| Sbjct 68 TTCCCAGCGAAAATAAGTCGTTGCTGATCAGGAGGAATTCCTTCTTTATCTTGGATTTTT 9 Query 94925 GCCTTGAC 94932 || || || Sbjct 8 GCTTTTAC 1 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 444656712717840