Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dugesia_20japonica_20[genbank_20GCA_5F001938525.1_202017-01-06] 648,594 sequences; 854,187,087 total letters Query= NC_007921.1 Length=147544 Score E Sequences producing significant alignments: (Bits) Value seq375912 89.7 5e-13 seq247457 89.7 5e-13 seq238832 89.7 5e-13 seq628701 82.4 7e-11 seq600562 82.4 7e-11 >seq375912 Length=2531 Score = 89.7 bits (98), Expect = 5e-13 Identities = 158/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 || || || | ||| | |||||||||| || || || |||||||| |||||||| | Sbjct 1308 CCGCCTCGAAGACGTAAAACTAAATGTAAAGTTGATTCTTTTTGAATATTGTAATCAGAC 1367 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | || || || |||| || || || || | || | || || ||||| ||||| Sbjct 1368 AATGTTCGTCCATCTTCTAATTGTTTCCCGGCAAATATAAGTCGTTGTTGGTCTGGAGGA 1427 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGC-TTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 ||||||||||| || ||| || ||| || | | || | ||||| | || || | Sbjct 1428 ATTCCTTCTTTATCTTGGATCTT-TGCTTTTACATTTTCTATTGTATCACTTGATTCCAC 1486 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | |||| |||||||| || |||||||| || ||||||||||| Sbjct 1487 TTCTAATGTAATTGTTTTACCAGTGAGAGTTTTAACAAAAATCTGCAT 1534 >seq247457 Length=2460 Score = 89.7 bits (98), Expect = 5e-13 Identities = 158/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 || || || | ||| | |||||||||| || || || |||||||| |||||||| | Sbjct 1593 CCGCCTCGAAGACGTAAAACTAAATGTAAAGTTGATTCTTTTTGAATATTGTAATCAGAC 1534 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | || || || |||| || || || || | || | || || ||||| ||||| Sbjct 1533 AATGTTCGTCCATCTTCTAATTGTTTCCCGGCAAATATAAGTCGTTGTTGGTCTGGAGGA 1474 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGC-TTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 ||||||||||| || ||| || ||| || | | || | ||||| | || || | Sbjct 1473 ATTCCTTCTTTATCTTGGATCTT-TGCTTTTACATTTTCTATTGTATCACTTGATTCCAC 1415 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | |||| |||||||| || |||||||| || ||||||||||| Sbjct 1414 TTCTAATGTAATTGTTTTACCAGTGAGAGTTTTAACAAAAATCTGCAT 1367 >seq238832 Length=2299 Score = 89.7 bits (98), Expect = 5e-13 Identities = 158/228 (69%), Gaps = 2/228 (1%) Strand=Plus/Minus Query 131008 CCACCGCGCAAACGCAGCACTAAATGTATGGTCGACTCCTTTTGAATGTTGTAATCGCTC 131067 || || || | ||| | |||||||||| || || || |||||||| |||||||| | Sbjct 1432 CCGCCTCGAAGACGTAAAACTAAATGTAAAGTTGATTCTTTTTGAATATTGTAATCAGAC 1373 Query 131068 ATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTAGATTAAACGCTGCTGGTCCGGAGGG 131127 | || || || |||| || || || || | || | || || ||||| ||||| Sbjct 1372 AATGTTCGTCCATCTTCTAATTGTTTCCCGGCAAATATAAGTCGTTGTTGGTCTGGAGGA 1313 Query 131128 ATTCCTTCTTTGTCGGTGATTTTCTGC-TTGAGCTGCTCCACAGTATCGGTGGACTCGAT 131186 ||||||||||| || ||| || ||| || | | || | ||||| | || || | Sbjct 1312 ATTCCTTCTTTATCTTGGATCTT-TGCTTTTACATTTTCTATTGTATCACTTGATTCCAC 1254 Query 131187 GTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTACGAAAATCTGCAT 131234 || | |||| |||||||| || |||||||| || ||||||||||| Sbjct 1253 TTCTAATGTAATTGTTTTACCAGTGAGAGTTTTAACAAAAATCTGCAT 1206 >seq628701 Length=3193 Score = 82.4 bits (90), Expect = 7e-11 Identities = 135/192 (70%), Gaps = 2/192 (1%) Strand=Plus/Plus Query 131044 TCCTTTTGAATGTTGTAATC-GCTCATGGTGCGCGAGTCCTCTAGCTGCTTGCCTGCGTA 131102 ||||||||||| || ||||| | | | | | || | || |||| ||||| || ||| | Sbjct 1381 TCCTTTTGAATATTATAATCAGATAAAGTTCTGCCA-TCTTCTAATTGCTTTCCAGCGAA 1439 Query 131103 GATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTTGAGCTG 131162 ||| | ||| || || || ||||| || || |||||||| |||||| ||| | | Sbjct 1440 GATAAGACGTTGTTGATCTGGAGGAATACCCTCTTTGTCTTGGATTTTTGCCTTAACATT 1499 Query 131163 CTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTAC 131222 || | ||| || | || || | || | ||||| |||||||| || || ||||| || Sbjct 1500 TTCAATAGTGTCCGAAGATTCTACCTCTAAGGTAATTGTTTTACCCGTGAGGGTTTTAAC 1559 Query 131223 GAAAATCTGCAT 131234 ||||| ||||| Sbjct 1560 AAAAATTTGCAT 1571 >seq600562 Length=4425 Score = 82.4 bits (90), Expect = 7e-11 Identities = 99/132 (75%), Gaps = 2/132 (2%) Strand=Plus/Minus Query 131104 ATTAAACGCTGCTGGTCCGGAGGGATTCCTTCTTTGTCGGTGATTTTCTGCTT-GAGCTG 131162 || || || ||||| || ||||| || ||||||||||| |||||| ||||| || | Sbjct 4416 ATCAATCGTTGCTGATCTGGAGGAATACCTTCTTTGTCCTGGATTTT-TGCTTTGACATT 4358 Query 131163 CTCCACAGTATCGGTGGACTCGATGTCGACGGTAACGGTTTTACCGGTTAGAGTTTTTAC 131222 || | ||||||| | || || | || | |||| |||||| || ||||||||||| || Sbjct 4357 TTCAATAGTATCGCTTGATTCCACCTCCAATGTAATGGTTTTTCCAGTTAGAGTTTTGAC 4298 Query 131223 GAAAATCTGCAT 131234 || |||||||| Sbjct 4297 AAATATCTGCAT 4286 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 468185991624960