Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dugesia_20japonica_20[genbank_20GCA_5F001938525.1_202017-01-06] 648,594 sequences; 854,187,087 total letters Query= NC_008518.1 Length=174059 Score E Sequences producing significant alignments: (Bits) Value seq610803 170 2e-37 seq623066 150 2e-31 seq629926 149 7e-31 >seq610803 Length=1907 Score = 170 bits (188), Expect = 2e-37 Identities = 416/628 (66%), Gaps = 52/628 (8%) Strand=Plus/Minus Query 93070 TACGACATAATTGTACATTAAGCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATA- 93128 ||| | ||| || |||| || || ||||| || ||| | |||||| |||| || || Sbjct 1286 TACCAGATATTTAAACATCAAACAGGCAAAATCACAATGAAGACCTTCATCTC-TGCTAA 1228 Query 93129 TCAACTCATTGCTGAATGTTAAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTG 93188 | || || ||||| || | || || || | || ||| ||||| || | ||||||||||| Sbjct 1227 TTAATTCGTTGCTAAACGACAATCCCGGCATCAATCCACGTTTTTTTAACCAAAATATTG 1168 Query 93189 AAGCAAAACTACCAGaaaaaaaTATACCTTCCACGGCTGCAAATGCCACAATAC--GTTC 93246 | |||||||| ||| ||||||||| ||||| |||||||| || || || | | |||| Sbjct 1167 ATGCAAAACTTCCACTAAAAAATATCCCTTCAACGGCTGCGAAAGCAACTACTCGAGTTC 1108 Query 93247 GGCAAAATTTGCGGAATTACTGCTGATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAAT 93306 | ||||||| | ||| | ||||| ||||||||| | |||||| || | || Sbjct 1107 --CGAAATTTGAGTGCTTATCATTTATCCAACGTAAAGCCCATTGGGCTTTCTTTTGAAC 1050 Query 93307 ACAAGGTAGTGTTTCGATAGCGTTAAATAGGTAATC----------------TCGC---- 93346 ||| || | |||||| ||||| ||||||| || ||| || | Sbjct 1049 ACATGGCATTGTTTCAATAGCATTAAATAAGTTATCCCTGTAAAATATTTTATCACAAAC 990 Query 93347 -------TC--GTCCGAAT---CTCG-------TAT--GT-ATGTAT----CGATTAACA 93380 || | | || || | ||| || || ||| ||||||| | Sbjct 989 AAAACATTCATTTAAGCATTTACTTGGCTTTACTATCGGTGATATATGAATCGATTAATA 930 Query 93381 GAGAATACATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAAACATCTAG 93440 || |||||||| || || | || || || |||||||| || | || || | | Sbjct 929 AGGAGTACATTTCTGAGTGAATGTTTTCAATGGCAATTTGAAAACTATAAAATGCTTCGG 870 Query 93441 CTTCCGTGATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCAT 93500 |||| | |||| ||||||||| ||| | || ||||||||||| || ||||| |||| Sbjct 869 CTTCGGGAATCTTAACTTCTTGAATAAACCGTTCCACGAGATTTTCGTTTACTATTCCAT 810 Query 93501 CGGATGCTGCaaaaaaaGCCAATATATGCTTTATAAAATGTTTCTCATCATCTTTAAGCT 93560 | ||||||||||| || | | |||| ||||||| |||| ||| | | || Sbjct 809 CACTAGCTGCAAAAAACGCAAGAACATGCGAAATAAAATAACGTTCATTTTCTGTTAACT 750 Query 93561 TATCCCAATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCTT 93620 | | ||||| | | ||||||||| | ||| ||||| | || ||||||||||||| | Sbjct 749 TTTTCCAATGAGCAAAATCTTTTGATAAATCAACTTCATTTACCGTCCAAAACGATGATC 690 Query 93621 CTGCTTTTTTGTACATATCCCATATGTC 93648 || || || |||||||||| || || Sbjct 689 TAGCCTTGTTAAACATATCCCAAATATC 662 >seq623066 Length=2774 Score = 150 bits (166), Expect = 2e-31 Identities = 411/627 (66%), Gaps = 52/627 (8%) Strand=Plus/Minus Query 93070 TACGACATAATTGTACATTAAGCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATA- 93128 ||| | ||| || |||| || || ||||| || ||| | |||||| |||| || || Sbjct 1610 TACCAGATATTTAAACATCAAACAGGCAAAATCACAATGAAGACCTTCATCTC-TGCTAA 1552 Query 93129 TCAACTCATTGCTGAATGTTAAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTG 93188 | || || ||||| |||| || || || | || ||| ||||| || | |||||| ||| Sbjct 1551 TTAATTCGTTGCTAAATGACAATCCCGGCATCAATCCACGTTTTTTTAACCAAAACATTA 1492 Query 93189 AAGCAAAACTACCAGaaaaaaaTATACCTTCCACGGCTGCAAATGCCACAATACG--TTC 93246 | |||||||| ||| ||||||||| ||||| || |||| || || || | || ||| Sbjct 1491 ATGCAAAACTTCCACTAAAAAATATCCCTTCAACAACTGCGAAAGCAACTACTCGAGTTC 1432 Query 93247 GGCAAAATTTGCGGAATTACTGCTGATCCATTTTAAAGC-CCAATCGGCTTTTTTCTTAA 93305 | ||||||| | | ||| | ||||| |||||| ||| | |||||| || | | Sbjct 1431 TG--AAATTTGAGTACTTATCATTTATCCAACGTAAAGCTCCACTGGGCTTTCTTTTGAG 1374 Query 93306 TACAAGGTAGTGTTTCGATAGCGTTAAATAGGTAATC----------------TCGC--- 93346 ||| || | |||||| ||||| ||||||| || ||| || | Sbjct 1373 CACATGGCATTGTTTCAATAGCATTAAATAAGTTATCCCCTTAAAATATTTTATCACAAA 1314 Query 93347 -TCGT---------CC-------GA-------ATCTCGTATGTATGTATCGATTAACAGA 93382 || | || || |||| || |||| |||||||| | Sbjct 1313 ATCATTTATTTAAGCCTTTACTTGACTTTACTATCTGTGATATATGAGTCGATTAATAAG 1254 Query 93383 GAATACATTTCAGAATGGACATTCTCCATTGCAATTTGGAATCCGTAGAA-ACATCTAGC 93441 || |||||||| || || | || || | |||||||| || | || || || || || Sbjct 1253 GAGTACATTTCTGAGTGAATGTTTTCATTAGCAATTTGAAAACTATAAAATACTTCG-GC 1195 Query 93442 TTCCGTGATCTGCACTTCTTGAGAAAATCTCTCTACGAGATTTTCATTGACTATACCATC 93501 ||| | |||| ||||||||| ||| | || | ||||||||| || ||||| ||||| Sbjct 1194 TTCAGGAATCTAAACTTCTTGAATAAACCATTCCAGGAGATTTTCGTTTACTATTCCATC 1135 Query 93502 GGATGCTGCaaaaaaaGCCAATATATGCTTTATAAAATGTTTCTCATCATCTTTAAGCTT 93561 | ||||||||| || | | |||| ||||| | |||| ||| ||| ||| Sbjct 1134 ACTAGATGCAAAAAACGCAAGAACATGCGAAATAAATTAACGTTCATTTTCTGTAAACTT 1075 Query 93562 ATCCCAATCGGATAGATCTTTTGAAAGATCGACTTCTTCGACAGTCCAAAACGATGCTTC 93621 | ||||| | | ||||||||| | ||||||| | | || ||||||||||||| | Sbjct 1074 TTTCCAATGAGCAAAATCTTTTGATAAATCGACTCCATTTACCGTCCAAAACGATGATCT 1015 Query 93622 TGCTTTTTTGTACATATCCCATATGTC 93648 || || || |||| ||||| || || Sbjct 1014 AGCCTTGTTAAACATTTCCCAAATATC 988 >seq629926 Length=3335 Score = 149 bits (164), Expect = 7e-31 Identities = 213/300 (71%), Gaps = 0/300 (0%) Strand=Plus/Minus Query 93362 ATGTATGTATCGATTAACAGAGAATACATTTCAGAATGGACATTCTCCATTGCAATTTGG 93421 ||||| | ||| ||||| | |||||||||||| ||||| | |||||| || |||||||| Sbjct 2352 ATGTAGGAATCAATTAATACAGAATACATTTCCGAATGAATATTCTCAATAGCAATTTGA 2293 Query 93422 AATCCGTAGAAACATCTAGCTTCCGTGATCTGCACTTCTTGAGAAAATCTCTCTACGAGA 93481 || | ||| || | |||||| | || | | |||||| |||||| |||| ||| Sbjct 2292 AAACTGTAAAATGCTTCAGCTTCAGGAATTTTAATTTCTTGGATAAATCTTCCTACAAGA 2233 Query 93482 TTTTCATTGACTATACCATCGGATGCTGCaaaaaaaGCCAATATATGCTTTATAAAATGT 93541 |||||||| ||||| ||||| ||||||||||| | | | || ||||||| | Sbjct 2232 TTTTCATTCACTATTCCATCACTAGCTGCAAAAAACGAGAGAACGTGTGAAATAAAATAT 2173 Query 93542 TTCTCATCATCTTTAAGCTTATCCCAATCGGATAGATCTTTTGAAAGATCGACTTCTTCG 93601 |||| ||| | | |||| |||||| | | |||||| || | ||| ||||| | Sbjct 2172 CGTTCATTTTCTGTCAAGTTATTCCAATCAGCAAAATCTTTGGATAAATCAACTTCATTT 2113 Query 93602 ACAGTCCAAAACGATGCTTCTGCTTTTTTGTACATATCCCATATGTCTTGATATTGAATT 93661 |||| |||||| || | | || || || |||||||||| ||||| | | ||| |||| Sbjct 2112 ACAGACCAAAATGAAGATCTAGCCTTATTAAACATATCCCAAATGTCATTAAATTCAATT 2053 Score = 145 bits (160), Expect = 8e-30 Identities = 195/267 (73%), Gaps = 6/267 (2%) Strand=Plus/Minus Query 93070 TACGACATAATTGTACATTAAGCACGCAAAGTCGGTATGTAAACCTTCGTCTCGTGATA- 93128 ||| | ||| || |||| || || ||||| || ||| | |||||| |||| || || Sbjct 2694 TACCAGATATTTAAACATCAAACAGGCAAAATCACAATGAAGACCTTCATCTC-TGCTAA 2636 Query 93129 TCAACTCATTGCTGAATGTTAAACCTGGTAACAGTCCTCGTTTCTTGAGCCAAAATATTG 93188 |||| || || || || | ||| || || | || ||| ||||| || | ||||||||||| Sbjct 2635 TCAATTCGTTACTAAAAGATAATCCCGGCATCAATCCACGTTTTTTCAACCAAAATATTG 2576 Query 93189 AAGCAAAACTACCAGaaaaaaaTATACCTTCCACGGCTGCAAATGCCACAATACG--TTC 93246 | |||||||| ||| |||||||| ||||| || || ||||| || ||||| || ||| Sbjct 2575 ACGCAAAACTTCCACTGAAAAATATCCCTTCAACAGCAGCAAAAGCAACAATTCGAATTC 2516 Query 93247 GGCAAAATTTGCGGAATTACTGCTGATCCATTTTAAAGCCCAATCGGCTTTTTTCTTAAT 93306 ||||||||| ||| | ||||| | ||| ||||| | ||||||||| | || Sbjct 2515 --CAAAATTTGACTGTTTATCATTAATCCAATGTAACGCCCATTGGGCTTTTTTATGAAC 2458 Query 93307 ACAAGGTAGTGTTTCGATAGCGTTAAA 93333 ||| || | |||||| ||||| ||||| Sbjct 2457 ACATGGCATTGTTTCAATAGCATTAAA 2431 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 552346092828560