Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dugesia_20japonica_20[genbank_20GCA_5F001938525.1_202017-01-06] 648,594 sequences; 854,187,087 total letters Query= NC_013797.1 Length=108592 Score E Sequences producing significant alignments: (Bits) Value seq375912 113 3e-20 seq247457 113 3e-20 seq238832 113 3e-20 seq628701 95.1 8e-15 seq231077 89.7 4e-13 seq279238 87.8 1e-12 >seq375912 Length=2531 Score = 113 bits (124), Expect = 3e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 39493 CCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCC 39552 |||||||| | ||| | || ||||| ||||| ||||||||| ||||| ||||| | | Sbjct 1308 CCGCCTCGAAGACGTAAAACTAAATGTAAAGTTGATTCTTTTTGAATATTGTAATCAGAC 1367 Query 39553 AAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGT 39612 || ||| |||| || |||||||||||| |||| || | || || || || | || Sbjct 1368 AATGTTCGTCCATCTTCTAATTGTTTCCCGGCAAATATAAGTCGTTGTTGGTCTGGAGGA 1427 Query 39613 ACGCCTTCTTTGTCGCATATTTTTTGTTTAATCGTCGCTACTGTGTCTGCGCTTTCCACG 39672 | |||||||| || || ||| ||| | | ||| ||| || |||||| Sbjct 1428 ATTCCTTCTTTATCTTGGATCTTTGCTTTTACATTTTCTATTGTATCACTTGATTCCACT 1487 Query 39673 TCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCAT 39719 || || |||||||||||||| || | |||||| || || |||||||| Sbjct 1488 TCTAATGTAATTGTTTTACCAGTGAGAGTTTTAACAAAAATCTGCAT 1534 >seq247457 Length=2460 Score = 113 bits (124), Expect = 3e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 39493 CCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCC 39552 |||||||| | ||| | || ||||| ||||| ||||||||| ||||| ||||| | | Sbjct 1593 CCGCCTCGAAGACGTAAAACTAAATGTAAAGTTGATTCTTTTTGAATATTGTAATCAGAC 1534 Query 39553 AAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGT 39612 || ||| |||| || |||||||||||| |||| || | || || || || | || Sbjct 1533 AATGTTCGTCCATCTTCTAATTGTTTCCCGGCAAATATAAGTCGTTGTTGGTCTGGAGGA 1474 Query 39613 ACGCCTTCTTTGTCGCATATTTTTTGTTTAATCGTCGCTACTGTGTCTGCGCTTTCCACG 39672 | |||||||| || || ||| ||| | | ||| ||| || |||||| Sbjct 1473 ATTCCTTCTTTATCTTGGATCTTTGCTTTTACATTTTCTATTGTATCACTTGATTCCACT 1414 Query 39673 TCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCAT 39719 || || |||||||||||||| || | |||||| || || |||||||| Sbjct 1413 TCTAATGTAATTGTTTTACCAGTGAGAGTTTTAACAAAAATCTGCAT 1367 >seq238832 Length=2299 Score = 113 bits (124), Expect = 3e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 39493 CCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCC 39552 |||||||| | ||| | || ||||| ||||| ||||||||| ||||| ||||| | | Sbjct 1432 CCGCCTCGAAGACGTAAAACTAAATGTAAAGTTGATTCTTTTTGAATATTGTAATCAGAC 1373 Query 39553 AAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGT 39612 || ||| |||| || |||||||||||| |||| || | || || || || | || Sbjct 1372 AATGTTCGTCCATCTTCTAATTGTTTCCCGGCAAATATAAGTCGTTGTTGGTCTGGAGGA 1313 Query 39613 ACGCCTTCTTTGTCGCATATTTTTTGTTTAATCGTCGCTACTGTGTCTGCGCTTTCCACG 39672 | |||||||| || || ||| ||| | | ||| ||| || |||||| Sbjct 1312 ATTCCTTCTTTATCTTGGATCTTTGCTTTTACATTTTCTATTGTATCACTTGATTCCACT 1253 Query 39673 TCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCAT 39719 || || |||||||||||||| || | |||||| || || |||||||| Sbjct 1252 TCTAATGTAATTGTTTTACCAGTGAGAGTTTTAACAAAAATCTGCAT 1206 >seq628701 Length=3193 Score = 95.1 bits (104), Expect = 8e-15 Identities = 148/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 39508 AGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCCAAAACGCGTTCATCG 39567 || |||||||| | ||||||||| ||||| ||||||||||| | ||| | |||| Sbjct 1360 AGAACCAAATGAAGAGTGCTTTCCTTTTGAATATTATAATCAGATAAAGTTCTGCCATCT 1419 Query 39568 TCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGTACGCCTTCTTTGTCG 39627 || ||||| || || | || || | ||| || ||||| | || | || |||||||| Sbjct 1420 TCTAATTGCTTTCCAGCGAAGATAAGACGTTGTTGATCTGGAGGAATACCCTCTTTGTCT 1479 Query 39628 CATATTTTTTGTTTAATCGTCGCTACTGTGTCTGCGCTTTCCACGTCCAAAGTAATTGTT 39687 |||||| |||| | | | ||||| | ||| || || || ||||||||| Sbjct 1480 TGGATTTTTGCCTTAACATTTTCAATAGTGTCCGAAGATTCTACCTCTAAGGTAATTGTT 1539 Query 39688 TTACCCGTTAAAGTTTTTACGAAGATCTGCAT 39719 |||||||| | ||||| || || || ||||| Sbjct 1540 TTACCCGTGAGGGTTTTAACAAAAATTTGCAT 1571 >seq231077 Length=1080 Score = 89.7 bits (98), Expect = 4e-13 Identities = 155/222 (70%), Gaps = 4/222 (2%) Strand=Plus/Minus Query 39500 GCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCCAAAACGC 39559 |||| || | |||||||| ||||| ||||||||| ||||||||||| | || | Sbjct 590 GCAATCGTAACACCAAATGTAAAGTTGATTCTTTTTGAATATTATAATCAGGTAATGTTC 531 Query 39560 GTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGTACGCCTT 39619 | |||| |||||||||||||| | ||||| | || || ||||| || || | |||| Sbjct 530 GACCATCTTCCAATTGTTTCCCAGCGAAAATAAGTCGTTGTTGATCAGAAGGAATTCCTT 471 Query 39620 CTTTGTCGCATATTTTT--TGTTTAATCGTCGCTACTGTGTCTGCGCTTTCCACGTCCAA 39677 |||| || |||||| | || || || || | | || || ||| || || || Sbjct 470 CTTTATCTTCGATTTTTGCTTTTACATTTTCAATAGTATCACT-TGC-TTCAACTTCTAA 413 Query 39678 AGTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCAT 39719 ||| || || || || ||||| ||||| || || || | ||| Sbjct 412 AGTGATAGTCTTGCCAGTTAATGTTTTCACAAAAATTTCCAT 371 >seq279238 Length=1756 Score = 87.8 bits (96), Expect = 1e-12 Identities = 158/229 (69%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 39493 CCGCCTCGCAAACGCAGTACCAAATGCAAAGTGCTTTCTTTTTGTATATTATAATCGGCC 39552 || |||| ||||| | |||||||||||||| ||| ||||| || |||||||| | | Sbjct 1407 CCACCTCTTAAACGTAAGACCAAATGCAAAGTTGATTCCTTTTGAATGTTATAATCAGAC 1348 Query 39553 AAAACGCGTTCATCGTCCAATTGTTTCCCGCCAAAAATTAAACGCTGCTGATCCGAGGGT 39612 ||| | |||| |||||||| || || |||| || || | |||||||| | || Sbjct 1347 AAAGTTCTACCATCTTCCAATTGCTTACCAGCAAATATCAATCTTTGCTGATCTGGAGGA 1288 Query 39613 ACGCCTTCTTTGTCGCATATTTTTTGTTTA--ATCGTCGCTACTGTGTCTGCGCTTTCCA 39670 | ||||| || || ||||| |||| || ||| || | || | ||| | Sbjct 1287 ATACCTTCCTTATCTTGAATTTTAGATTTAACATTTTCGATA--GAATCAGATGATTCGA 1230 Query 39671 CGTCCAAAGTAATTGTTTTACCCGTTAAAGTTTTTACGAAGATCTGCAT 39719 | || || || || ||||| || ||||| ||||| || || |||||||| Sbjct 1229 CTTCTAATGTTATAGTTTTTCCTGTTAATGTTTTAACAAATATCTGCAT 1181 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 344623733845202