Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dugesia_20japonica_20[genbank_20GCA_5F001938525.1_202017-01-06] 648,594 sequences; 854,187,087 total letters Query= NC_016924.1 Length=185139 Score E Sequences producing significant alignments: (Bits) Value seq610803 246 4e-60 seq629926 237 2e-57 seq623066 208 9e-49 seq105517 141 1e-28 seq309245 96.9 4e-15 >seq610803 Length=1907 Score = 246 bits (272), Expect = 4e-60 Identities = 399/583 (68%), Gaps = 46/583 (8%) Strand=Plus/Minus Query 37160 ATATTTAAACAATAAACATGCAAAATCACAATGTAAACCTTCATCTCTACTTATCAATTC 37219 ||||||||||| ||||| |||||||||||||| | |||||||||||| || || ||||| Sbjct 1280 ATATTTAAACATCAAACAGGCAAAATCACAATGAAGACCTTCATCTCTGCTAATTAATTC 1221 Query 37220 ATTAGAAAAGGTTAATCCTGGCATTAAACCTCtttttttAATCCAAAATATTGCTGCAAA 37279 || ||| | ||||| ||||| || || | |||||| | ||||||||||| |||||| Sbjct 1220 GTTGCTAAACGACAATCCCGGCATCAATCCACGTTTTTTTAACCAAAATATTGATGCAAA 1161 Query 37280 AGATCCAGAAAAGAAAATACCTTCAACTGCTGCAAATGCTACAAGACGTGTACCGAAAGT 37339 | |||| ||| || || |||||||| ||||| || || || | || || |||||| | Sbjct 1160 ACTTCCACTAAAAAATATCCCTTCAACGGCTGCGAAAGCAACTACTCGAGTTCCGAAATT 1101 Query 37340 TGAACTATAATCAGAAATCCAtttttttGTCCAATCTGCCTTTAATTTAACACATTCAAT 37399 ||| | |||| ||||| | | ||| | || || || ||||||| || Sbjct 1100 TGAGTGCTTATCATTTATCCAACGTAAAGCCCATTGGGCTTTCTTTTGAACACATGGCAT 1041 Query 37400 TGTTTCAATTGCTTT---TAAG----------AGAAAGtttt------------------ 37428 ||||||||| || || |||| | || |||| Sbjct 1040 TGTTTCAATAGCATTAAATAAGTTATCCCTGTAAAATATTTTATCACAAACAAAACATTC 981 Query 37429 ---------ttt------CTTCACTATCTGTTATATAAGTATCAATTAGTAAACTATACA 37473 ||| ||| |||||| || ||||| | ||| |||| ||| |||| Sbjct 980 ATTTAAGCATTTACTTGGCTTTACTATCGGTGATATATGAATCGATTAATAAGGAGTACA 921 Query 37474 TTTCAGAGTGAATATTTTCAATAGCTATCTGAAAACCATAAAAACACCTAGCTTCAGATA 37533 |||| |||||||| |||||||| || || ||||||| |||||| ||||| | | Sbjct 920 TTTCTGAGTGAATGTTTTCAATGGCAATTTGAAAACTATAAAATGCTTCGGCTTCGGGAA 861 Query 37534 ATTGAACATCGTTAAAAAACCTCTTAGCTAAGTTTTCATTAACTATCCCATCACTAGCTG 37593 | ||| || | || ||||| | | | ||||| || ||||| ||||||||||||| Sbjct 860 TCTTAACTTCTTGAATAAACCGTTCCACGAGATTTTCGTTTACTATTCCATCACTAGCTG 801 Query 37594 CAAAGAAAGCAAGAACATATTTTATAAAATGTCTTTCATCATTTGATAATTTTTTCCAAT 37653 |||| || |||||||||| ||||||| | ||||| | || ||| |||||||||| Sbjct 800 CAAAAAACGCAAGAACATGCGAAATAAAATAACGTTCATTTTCTGTTAACTTTTTCCAAT 741 Query 37654 CATTAATATCTTTTGATAAATCAACTTCATCAACGGTCCAAAA 37696 | || ||||||||||||||||||||||| || |||||||| Sbjct 740 GAGCAAAATCTTTTGATAAATCAACTTCATTTACCGTCCAAAA 698 >seq629926 Length=3335 Score = 237 bits (262), Expect = 2e-57 Identities = 400/588 (68%), Gaps = 52/588 (9%) Strand=Plus/Minus Query 37160 ATATTTAAACAATAAACATGCAAAATCACAATGTAAACCTTCATCTCTACTTATCAATTC 37219 ||||||||||| ||||| |||||||||||||| | |||||||||||| || |||||||| Sbjct 2688 ATATTTAAACATCAAACAGGCAAAATCACAATGAAGACCTTCATCTCTGCTAATCAATTC 2629 Query 37220 ATTAGAAAAGGTTAATCCTGGCATTAAACCTCtttttttAATCCAAAATATTGCTGCAAA 37279 ||| ||| | |||||| ||||| || || | |||||| | ||||||||||| ||||| Sbjct 2628 GTTACTAAAAGATAATCCCGGCATCAATCCACGTTTTTTCAACCAAAATATTGACGCAAA 2569 Query 37280 AGATCCAGAAAAGAAAATACCTTCAACTGCTGCAAATGCTACAAGACGTGTACCGAAAGT 37339 | |||| || || || |||||||| || ||||| || |||| || | || ||| | Sbjct 2568 ACTTCCACTGAAAAATATCCCTTCAACAGCAGCAAAAGCAACAATTCGAATTCCAAAATT 2509 Query 37340 TGAACTATAATCAGAAATCCAtttttttGTCCAATCTGCCTTTAATTTAACACATTCAAT 37399 ||| | |||| |||||| | | | ||| | || ||| | ||||||| || Sbjct 2508 TGACTGTTTATCATTAATCCAATGTAACGCCCATTGGGCTTTTTTATGAACACATGGCAT 2449 Query 37400 TGTTTCAATTGCTTTTAAGA-------------GAAAGtttt------------------ 37428 ||||||||| || || || | |||| | || Sbjct 2448 TGTTTCAATAGCATTAAACAAGTTGTTCCTGTTGAAATTCTTATATCATAGCAAGATACG 2389 Query 37429 ----------tttC---------TTCACTATCTGTTATATAAGTATCAATTAGTAAACTA 37469 |||| |||| |||| || || || | |||||||| || | | Sbjct 2388 AATGATTAACTTTCATACTTAGTTTCATTATCGGTAATGTAGGAATCAATTAATACAGAA 2329 Query 37470 TACATTTCAGAGTGAATATTTTCAATAGCTATCTGAAAACCATAAAAACACCTAGCTTCA 37529 |||||||| || |||||||| |||||||| || ||||||| ||||| ||||||| Sbjct 2328 TACATTTCCGAATGAATATTCTCAATAGCAATTTGAAAACTGTAAAATGCTTCAGCTTCA 2269 Query 37530 GATAATTGAACATCGTTAAAAAACCT-CTTAGCTAAGTTTTCATTAACTATCCCATCACT 37588 | | || || || | | ||| || | || | | |||||||| ||||| |||||||| Sbjct 2268 GGAATTTTAATTTCTTGGATAAATCTTCCTA-CAAGATTTTCATTCACTATTCCATCACT 2210 Query 37589 AGCTGCAAAGAAAGCAAGAACATATTTTATAAAATGTCTTTCATCATTTGATAATTTTTT 37648 ||||||||| || | ||||| | | ||||||| || ||||| | || || || || Sbjct 2209 AGCTGCAAAAAACGAGAGAACGTGTGAAATAAAATATCGTTCATTTTCTGTCAAGTTATT 2150 Query 37649 CCAATCATTAATATCTTTTGATAAATCAACTTCATCAACGGTCCAAAA 37696 ||||||| || |||||| |||||||||||||||| || | |||||| Sbjct 2149 CCAATCAGCAAAATCTTTGGATAAATCAACTTCATTTACAGACCAAAA 2102 >seq623066 Length=2774 Score = 208 bits (230), Expect = 9e-49 Identities = 394/582 (68%), Gaps = 46/582 (8%) Strand=Plus/Minus Query 37160 ATATTTAAACAATAAACATGCAAAATCACAATGTAAACCTTCATCTCTACTTATCAATTC 37219 ||||||||||| ||||| |||||||||||||| | |||||||||||| || || ||||| Sbjct 1604 ATATTTAAACATCAAACAGGCAAAATCACAATGAAGACCTTCATCTCTGCTAATTAATTC 1545 Query 37220 ATTAGAAAAGGTTAATCCTGGCATTAAACCTCtttttttAATCCAAAATATTGCTGCAAA 37279 || ||| | ||||| ||||| || || | |||||| | |||||| ||| |||||| Sbjct 1544 GTTGCTAAATGACAATCCCGGCATCAATCCACGTTTTTTTAACCAAAACATTAATGCAAA 1485 Query 37280 AGATCCAGAAAAGAAAATACCTTCAACTGCTGCAAATGCTACAAGACGTGTACCGAAAGT 37339 | |||| ||| || || |||||||| |||| || || || | || || | |||| | Sbjct 1484 ACTTCCACTAAAAAATATCCCTTCAACAACTGCGAAAGCAACTACTCGAGTTCTGAAATT 1425 Query 37340 TGAACTATAATCAGAAATCCAtttttttG-TCCAATCTGCCTTTAATTTAACACATTCAA 37398 ||| | |||| ||||| | | |||| | || || || | ||||| | Sbjct 1424 TGAGTACTTATCATTTATCCAACGTAAAGCTCCACTGGGCTTTCTTTTGAGCACATGGCA 1365 Query 37399 TTGTTTCAATTGCTTT---TAAG-----------------------AGAAAGt------t 37426 |||||||||| || || |||| | ||| | | Sbjct 1364 TTGTTTCAATAGCATTAAATAAGTTATCCCCTTAAAATATTTTATCACAAAATCATTTAT 1305 Query 37427 tt-----ttt------CTTCACTATCTGTTATATAAGTATCAATTAGTAAACTATACATT 37475 || ||| ||| ||||||||| ||||| | || |||| ||| |||||| Sbjct 1304 TTAAGCCTTTACTTGACTTTACTATCTGTGATATATGAGTCGATTAATAAGGAGTACATT 1245 Query 37476 TCAGAGTGAATATTTTCAATAGCTATCTGAAAACCATAAAAACACCTAG-CTTCAGATAA 37534 || |||||||| |||||| |||| || ||||||| |||||| || | | |||||| | Sbjct 1244 TCTGAGTGAATGTTTTCATTAGCAATTTGAAAACTATAAAAT-ACTTCGGCTTCAGGAAT 1186 Query 37535 TTGAACATCGTTAAAAAACCTCTTAGCTAAGTTTTCATTAACTATCCCATCACTAGCTGC 37594 | ||| || | || ||||| | | ||||| || ||||| |||||||||| ||| Sbjct 1185 CTAAACTTCTTGAATAAACCATTCCAGGAGATTTTCGTTTACTATTCCATCACTAGATGC 1126 Query 37595 AAAGAAAGCAAGAACATATTTTATAAAATGTCTTTCATCATTTGATAATTTTTTCCAATC 37654 ||| || |||||||||| ||||| | | ||||| | || || |||||||||| Sbjct 1125 AAAAAACGCAAGAACATGCGAAATAAATTAACGTTCATTTTCTGTAAACTTTTTCCAATG 1066 Query 37655 ATTAATATCTTTTGATAAATCAACTTCATCAACGGTCCAAAA 37696 | || ||||||||||||||| ||| ||| || |||||||| Sbjct 1065 AGCAAAATCTTTTGATAAATCGACTCCATTTACCGTCCAAAA 1024 >seq105517 Length=321 Score = 141 bits (156), Expect = 1e-28 Identities = 138/178 (78%), Gaps = 0/178 (0%) Strand=Plus/Minus Query 37160 ATATTTAAACAATAAACATGCAAAATCACAATGTAAACCTTCATCTCTACTTATCAATTC 37219 ||||||||||| ||||| |||||||||||||| | ||||||||||||||| || ||||| Sbjct 316 ATATTTAAACATCAAACAGGCAAAATCACAATGAAGACCTTCATCTCTACTAATTAATTC 257 Query 37220 ATTAGAAAAGGTTAATCCTGGCATTAAACCTCtttttttAATCCAAAATATTGCTGCAAA 37279 || ||| | ||||| ||||| || || | |||||| | |||||| ||| |||||| Sbjct 256 GTTGCTAAAAGACAATCCCGGCATCAATCCACGTTTTTTTAACCAAAAAATTAATGCAAA 197 Query 37280 AGATCCAGAAAAGAAAATACCTTCAACTGCTGCAAATGCTACAAGACGTGTACCGAAA 37337 | |||| ||| || || |||||||| ||||| || || || | || || |||||| Sbjct 196 ACTTCCACTAAAAAATATCCCTTCAACAGCTGCGAAAGCAACTACTCGAGTTCCGAAA 139 >seq309245 Length=1256 Score = 96.9 bits (106), Expect = 4e-15 Identities = 109/145 (75%), Gaps = 1/145 (1%) Strand=Plus/Plus Query 37160 ATATTTAAACAATAAACATGCAAAATCACAATGTAAACCTTCATCTCTACTTATCAATTC 37219 |||||| ||||| ||||| ||||||| ||||| |||||||||||||| || |||||||| Sbjct 251 ATATTTGAACAACAAACAGGCAAAATTACAATAGAAACCTTCATCTCTGCTAATCAATTC 310 Query 37220 ATTAGAAAAGGTTAATCCTGGCATTAAACCTCtttttttAATCCAAAATATTGCTGCAAA 37279 || || | |||| | ||||| || | ||| ||| || |||||||| |||||| Sbjct 311 GTTGCTGAAAGATAATACCGGCATCAATTTACGTTTAATAA-CCCAAATATTGATGCAAA 369 Query 37280 AGATCCAGAAAAGAAAATACCTTCA 37304 | |||| || || || |||||| Sbjct 370 ACTTCCACTGAAAAATATCCCTTCA 394 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 587514635967760