Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dugesia_20japonica_20[genbank_20GCA_5F001938525.1_202017-01-06] 648,594 sequences; 854,187,087 total letters Query= NC_020842.1 Length=79114 Score E Sequences producing significant alignments: (Bits) Value seq608164 109 3e-19 seq532889 109 3e-19 seq374043 109 3e-19 seq497881 82.4 4e-11 seq487200 82.4 4e-11 seq221603 82.4 4e-11 >seq608164 Length=2812 Score = 109 bits (120), Expect = 3e-19 Identities = 281/426 (66%), Gaps = 4/426 (1%) Strand=Plus/Plus Query 25933 CATAAATAAATCTGGAATCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTCTTT 25992 ||| || ||||| |||||||| | ||| |||||| ||||| ||| || | ||| | Sbjct 1785 CATGAACAAATCGGGAATCCATAAAGCACAAAATAGATCTCGAGCTTTCTTCGATTCGTC 1844 Query 25993 TCCGTGATTCTTTTTTAGATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAAATA 26052 || ||||| || || || | || || |||||| | |||||| ||||| | ||| Sbjct 1845 GCCATGATTTTTGCGTAATTCGAGAAATTCCTGAATATCAGCGTGCCACGGTTCAATATA 1904 Query 26053 GATAGCAAAACTACCTTTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCATT 26112 | ||||| || | || ||||||||||| || |||| |||| | ||| Sbjct 1905 AACTGCAAACGCGCCAGGACGCTTATTACCACCTTGATCGACATATCGAGCAGCATAATT 1964 Query 26113 GAAAACTTTCAACATTGGAACTAATCCAGTTGAAAATCCGTTTGTGCTATGAATCTTGGA 26172 ||| |||| ||||| ||| ||||||| | || | ||||| || | |||| || Sbjct 1965 GAACACTTGTAACATCGGAGTTAATCCATTCGACACACCGTTAGTTCCGATAATCGCTGA 2024 Query 26173 TCCTGTCGATCTAATATCGTGAGCATGAATACCGATTCCACCAGCCCATTTTGAAATAGC 26232 || || | ||||||| || ||| | || ||||| || || |||| || || Sbjct 2025 GCCAGTTGCTCTAATACAATGCACATTTAATCCTATTCCTCCGGCATATTTCGATATTAA 2084 Query 26233 TGCACAATCTGAAACTGTATCGAAAATTCCTTTTATGCTATCACCTTTCATTCCTAATAA 26292 || || || | ||| ||||| || | ||||| ||| | |||||| ||| | Sbjct 2085 CGCGCACTCCTTTAATGTCGTAAAAATACCATCAATGCTGTCATCCTTCATTGTTAACAG 2144 Query 26293 AAAACAAGAAGATAATTG--CGAATGAGTTGTTCCTGAATTAAATAATGTCGGTGTAGCA 26350 |||||| |||||||| | ||| | || || ||||| ||||||||||| | ||| Sbjct 2145 GAAACAACTCGATAATTGTCCAAAT--TTCGTGCCGGAATTGAATAATGTCGGAGAGGCA 2202 Query 26351 TGAGTA 26356 ||| || Sbjct 2203 TGAATA 2208 >seq532889 Length=2432 Score = 109 bits (120), Expect = 3e-19 Identities = 281/426 (66%), Gaps = 4/426 (1%) Strand=Plus/Plus Query 25933 CATAAATAAATCTGGAATCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTCTTT 25992 ||| || ||||| |||||||| | ||| |||||| ||||| ||| || | ||| | Sbjct 1405 CATGAACAAATCGGGAATCCATAAAGCACAAAATAGATCTCGAGCTTTCTTCGATTCGTC 1464 Query 25993 TCCGTGATTCTTTTTTAGATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAAATA 26052 || ||||| || || || | || || |||||| | |||||| ||||| | ||| Sbjct 1465 GCCATGATTTTTGCGTAATTCGAGAAATTCCTGAATATCAGCGTGCCACGGTTCAATATA 1524 Query 26053 GATAGCAAAACTACCTTTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCATT 26112 | ||||| || | || ||||||||||| || |||| |||| | ||| Sbjct 1525 AACTGCAAACGCGCCAGGACGCTTATTACCACCTTGATCGACATATCGAGCAGCATAATT 1584 Query 26113 GAAAACTTTCAACATTGGAACTAATCCAGTTGAAAATCCGTTTGTGCTATGAATCTTGGA 26172 ||| |||| ||||| ||| ||||||| | || | ||||| || | |||| || Sbjct 1585 GAACACTTGTAACATCGGAGTTAATCCATTCGACACACCGTTAGTTCCGATAATCGCTGA 1644 Query 26173 TCCTGTCGATCTAATATCGTGAGCATGAATACCGATTCCACCAGCCCATTTTGAAATAGC 26232 || || | ||||||| || ||| | || ||||| || || |||| || || Sbjct 1645 GCCAGTTGCTCTAATACAATGCACATTTAATCCTATTCCTCCGGCATATTTCGATATTAA 1704 Query 26233 TGCACAATCTGAAACTGTATCGAAAATTCCTTTTATGCTATCACCTTTCATTCCTAATAA 26292 || || || | ||| ||||| || | ||||| ||| | |||||| ||| | Sbjct 1705 CGCGCACTCCTTTAATGTCGTAAAAATACCATCAATGCTGTCATCCTTCATTGTTAACAG 1764 Query 26293 AAAACAAGAAGATAATTG--CGAATGAGTTGTTCCTGAATTAAATAATGTCGGTGTAGCA 26350 |||||| |||||||| | ||| | || || ||||| ||||||||||| | ||| Sbjct 1765 GAAACAACTCGATAATTGTCCAAAT--TTCGTGCCGGAATTGAATAATGTCGGAGAGGCA 1822 Query 26351 TGAGTA 26356 ||| || Sbjct 1823 TGAATA 1828 >seq374043 Length=1849 Score = 109 bits (120), Expect = 3e-19 Identities = 281/426 (66%), Gaps = 4/426 (1%) Strand=Plus/Minus Query 25933 CATAAATAAATCTGGAATCCACATTGCATAAAATAAATCTCTCGCTCTCATTTCTTCTTT 25992 ||| || ||||| |||||||| | ||| |||||| ||||| ||| || | ||| | Sbjct 1206 CATGAACAAATCGGGAATCCATAAAGCACAAAATAGATCTCGAGCTTTCTTCGATTCGTC 1147 Query 25993 TCCGTGATTCTTTTTTAGATCTAAGAAATCAAAAATATCTGAGTGCCATGGTTCTAAATA 26052 || ||||| || || || | || || |||||| | |||||| ||||| | ||| Sbjct 1146 GCCATGATTTTTGCGTAATTCGAGAAATTCCTGAATATCAGCGTGCCACGGTTCAATATA 1087 Query 26053 GATAGCAAAACTACCTTTTCTTTTTCCTCCACCTTGATCTACGTATCTTGCAGTTTCATT 26112 | ||||| || | || ||||||||||| || |||| |||| | ||| Sbjct 1086 AACTGCAAACGCGCCAGGACGCTTATTACCACCTTGATCGACATATCGAGCAGCATAATT 1027 Query 26113 GAAAACTTTCAACATTGGAACTAATCCAGTTGAAAATCCGTTTGTGCTATGAATCTTGGA 26172 ||| |||| ||||| ||| ||||||| | || | ||||| || | |||| || Sbjct 1026 GAACACTTGTAACATCGGAGTTAATCCATTCGACACACCGTTAGTTCCGATAATCGCTGA 967 Query 26173 TCCTGTCGATCTAATATCGTGAGCATGAATACCGATTCCACCAGCCCATTTTGAAATAGC 26232 || || | ||||||| || ||| | || ||||| || || |||| || || Sbjct 966 GCCAGTTGCTCTAATACAATGCACATTTAATCCTATTCCTCCGGCATATTTCGATATTAA 907 Query 26233 TGCACAATCTGAAACTGTATCGAAAATTCCTTTTATGCTATCACCTTTCATTCCTAATAA 26292 || || || | ||| ||||| || | ||||| ||| | |||||| ||| | Sbjct 906 CGCGCACTCCTTTAATGTCGTAAAAATACCATCAATGCTGTCATCCTTCATTGTTAACAG 847 Query 26293 AAAACAAGAAGATAATTG--CGAATGAGTTGTTCCTGAATTAAATAATGTCGGTGTAGCA 26350 |||||| |||||||| | ||| | || || ||||| ||||||||||| | ||| Sbjct 846 GAAACAACTCGATAATTGTCCAAAT--TTCGTGCCGGAATTGAATAATGTCGGAGAGGCA 789 Query 26351 TGAGTA 26356 ||| || Sbjct 788 TGAATA 783 >seq497881 Length=7071 Score = 82.4 bits (90), Expect = 4e-11 Identities = 154/220 (70%), Gaps = 6/220 (3%) Strand=Plus/Minus Query 24911 ATATTTTGAACTGATCCATTTTCTCTCAATAGATTCAATCT--CATATTCGGTGTCCAAA 24968 ||||| |||| ||||||| | || ||| |||| || | |||||| | ||| | Sbjct 4957 ATATTCTGAATTGATCCACGAT-TCGCAA-AGATCGCATTTTTCATATTTTCCGACCACA 4900 Query 24969 GATT-AATTTTTTCAAGATCTCTAATCAAGTGTTTATTTATGATAATAAATTCTCCAGAC 25027 |||| |||| |||| |||| | |||| ||| ||| | || | ||||||||| Sbjct 4899 GATTCAATTCAATCAA-ATCTTTCATCAGATGTCGATTAACGACTACGAATTCTCCACCA 4841 Query 25028 AAAACTCTTCTTATTGATAAGTTTGAAGTGAATGGTTCAAAACATTCATTATTTCCTAAG 25087 |||| ||||||| | | || | ||| | ||||||||| ||| ||||||| | Sbjct 4840 TAAACCCTTCTTAAATACATATTACTTGAGAAAGCTTCAAAACACTCAGTATTTCCCATT 4781 Query 25088 ATTTGAGAAGTAGATGCTGTTGGCATTAATGCTATTAATA 25127 ||||||||||| ||| ||||||||||| ||| | ||||| Sbjct 4780 ATTTGAGAAGTTGATACTGTTGGCATTGGTGCAACTAATA 4741 >seq487200 Length=3084 Score = 82.4 bits (90), Expect = 4e-11 Identities = 154/220 (70%), Gaps = 6/220 (3%) Strand=Plus/Plus Query 24911 ATATTTTGAACTGATCCATTTTCTCTCAATAGATTCAATCT--CATATTCGGTGTCCAAA 24968 ||||| |||| ||||||| | || ||| |||| || | |||||| | ||| | Sbjct 2115 ATATTCTGAATTGATCCACGAT-TCGCAA-AGATCGCATTTTTCATATTTTCCGACCACA 2172 Query 24969 GATT-AATTTTTTCAAGATCTCTAATCAAGTGTTTATTTATGATAATAAATTCTCCAGAC 25027 |||| |||| |||| |||| | |||| ||| ||| | || | ||||||||| Sbjct 2173 GATTCAATTCAATCAA-ATCTTTCATCAGATGTCGATTAACGACTACGAATTCTCCACCA 2231 Query 25028 AAAACTCTTCTTATTGATAAGTTTGAAGTGAATGGTTCAAAACATTCATTATTTCCTAAG 25087 |||| ||||||| | | || | ||| | ||||||||| ||| ||||||| | Sbjct 2232 TAAACCCTTCTTAAATACATATTACTTGAGAAAGCTTCAAAACACTCAGTATTTCCCATT 2291 Query 25088 ATTTGAGAAGTAGATGCTGTTGGCATTAATGCTATTAATA 25127 ||||||||||| ||| ||||||||||| ||| | ||||| Sbjct 2292 ATTTGAGAAGTTGATACTGTTGGCATTGGTGCAACTAATA 2331 >seq221603 Length=5497 Score = 82.4 bits (90), Expect = 4e-11 Identities = 154/220 (70%), Gaps = 6/220 (3%) Strand=Plus/Plus Query 24911 ATATTTTGAACTGATCCATTTTCTCTCAATAGATTCAATCT--CATATTCGGTGTCCAAA 24968 ||||| |||| ||||||| | || ||| |||| || | |||||| | ||| | Sbjct 5025 ATATTCTGAATTGATCCACGAT-TCGCAA-AGATCGCATTTTTCATATTTTCCGACCACA 5082 Query 24969 GATT-AATTTTTTCAAGATCTCTAATCAAGTGTTTATTTATGATAATAAATTCTCCAGAC 25027 |||| |||| |||| |||| | |||| ||| ||| | || | ||||||||| Sbjct 5083 GATTCAATTCAATCAA-ATCTTTCATCAGATGTCGATTAACGACTACGAATTCTCCACCA 5141 Query 25028 AAAACTCTTCTTATTGATAAGTTTGAAGTGAATGGTTCAAAACATTCATTATTTCCTAAG 25087 |||| ||||||| | | || | ||| | ||||||||| ||| ||||||| | Sbjct 5142 TAAACCCTTCTTAAATACATATTACTTGAGAAAGCTTCAAAACACTCAGTATTTCCCATT 5201 Query 25088 ATTTGAGAAGTAGATGCTGTTGGCATTAATGCTATTAATA 25127 ||||||||||| ||| ||||||||||| ||| | ||||| Sbjct 5202 ATTTGAGAAGTTGATACTGTTGGCATTGGTGCAACTAATA 5241 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 251039784748550