Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dugesia_20japonica_20[genbank_20GCA_5F001938525.1_202017-01-06] 648,594 sequences; 854,187,087 total letters Query= NC_025257.1 Length=102759 Score E Sequences producing significant alignments: (Bits) Value seq375912 123 2e-23 seq247457 123 2e-23 seq238832 123 2e-23 seq504844 107 1e-18 seq231077 105 4e-18 seq600562 98.7 6e-16 >seq375912 Length=2531 Score = 123 bits (136), Expect = 2e-23 Identities = 173/239 (72%), Gaps = 4/239 (2%) Strand=Plus/Plus Query 33512 TAAAATCGTCACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGT 33571 |||||| | ||| |||| | |||||| || ||||||| ||| |||||||| || | Sbjct 1299 TAAAAT--TAACCGCCTCGAAGACGTAAAACTAAATGTAAAGTTGATTCTTTTTGAATAT 1356 Query 33572 TGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCT 33631 ||||||| || | ||| ||| | || || |||||||| |||||||| || | || || | Sbjct 1357 TGTAATCAGACAATGTTCGTCCATCTTCTAATTGTTTCCCGGCAAATATAAGTCGTTGTT 1416 Query 33632 GATCTTGCGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCG 33690 | ||| | || | |||||||| || || || || || |||| || | || || Sbjct 1417 GGTCTGGAGGAATTCCTTCTTTATCTTGGATCTT-TGCTTTTACATTTTCTATTGTATCA 1475 Query 33691 CTTGATTCCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 ||||||||||| || | || || |||||||| || | ||||| ||||| |||||||| Sbjct 1476 CTTGATTCCACTTCTAATGTAATTGTTTTACCAGTGAGAGTTTTAACAAAAATCTGCAT 1534 Score = 118 bits (130), Expect = 7e-22 Identities = 174/243 (72%), Gaps = 4/243 (2%) Strand=Plus/Plus Query 33513 AAAATCGTCA--CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATG 33570 |||||| || ||||| | || ||||| || ||||||| ||| || ||||| || Sbjct 1524 AAAATCTGCATTCCACCACGTAATCGTAAAACTAAATGTAAAGTTGATTCCTTTTGGATA 1583 Query 33571 TTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGC 33630 |||||||| || | ||| ||| | || || |||||||| || |||||||| | || || Sbjct 1584 TTGTAATCAGACAATGTTCGTCCATCTTCTAATTGTTTCCCAGCAAAAATAAGTCGTTGT 1643 Query 33631 TGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTCACG-GTGTC 33689 |||||| | || | ||||| || || || || || || |||| ||| ||||| Sbjct 1644 TGATCTGGAGGAATTCCTTCCTTATCTTGGATCTT-TGCTTTTACATTTTCAATTGTGTC 1702 Query 33690 GCTTGATTCCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 ||||||||| || |||| || || || ||||| || | ||||| ||||| || ||||| Sbjct 1703 GCTTGATTCGACTTCAAGAGTTATAGTCTTACCAGTAAGTGTTTTCACAAATATTTGCAT 1762 Query 33750 AGT 33752 || Sbjct 1763 CGT 1765 >seq247457 Length=2460 Score = 123 bits (136), Expect = 2e-23 Identities = 173/239 (72%), Gaps = 4/239 (2%) Strand=Plus/Minus Query 33512 TAAAATCGTCACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGT 33571 |||||| | ||| |||| | |||||| || ||||||| ||| |||||||| || | Sbjct 1602 TAAAAT--TAACCGCCTCGAAGACGTAAAACTAAATGTAAAGTTGATTCTTTTTGAATAT 1545 Query 33572 TGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCT 33631 ||||||| || | ||| ||| | || || |||||||| |||||||| || | || || | Sbjct 1544 TGTAATCAGACAATGTTCGTCCATCTTCTAATTGTTTCCCGGCAAATATAAGTCGTTGTT 1485 Query 33632 GATCTTGCGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCG 33690 | ||| | || | |||||||| || || || || || |||| || | || || Sbjct 1484 GGTCTGGAGGAATTCCTTCTTTATCTTGGATCTT-TGCTTTTACATTTTCTATTGTATCA 1426 Query 33691 CTTGATTCCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 ||||||||||| || | || || |||||||| || | ||||| ||||| |||||||| Sbjct 1425 CTTGATTCCACTTCTAATGTAATTGTTTTACCAGTGAGAGTTTTAACAAAAATCTGCAT 1367 Score = 118 bits (130), Expect = 7e-22 Identities = 174/243 (72%), Gaps = 4/243 (2%) Strand=Plus/Minus Query 33513 AAAATCGTCA--CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATG 33570 |||||| || ||||| | || ||||| || ||||||| ||| || ||||| || Sbjct 1377 AAAATCTGCATTCCACCACGTAATCGTAAAACTAAATGTAAAGTTGATTCCTTTTGGATA 1318 Query 33571 TTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGC 33630 |||||||| || | ||| ||| | || || |||||||| || |||||||| | || || Sbjct 1317 TTGTAATCAGACAATGTTCGTCCATCTTCTAATTGTTTCCCAGCAAAAATAAGTCGTTGT 1258 Query 33631 TGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTCACG-GTGTC 33689 |||||| | || | ||||| || || || || || || |||| ||| ||||| Sbjct 1257 TGATCTGGAGGAATTCCTTCCTTATCTTGGATCTT-TGCTTTTACATTTTCAATTGTGTC 1199 Query 33690 GCTTGATTCCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 ||||||||| || |||| || || || ||||| || | ||||| ||||| || ||||| Sbjct 1198 GCTTGATTCGACTTCAAGAGTTATAGTCTTACCAGTAAGTGTTTTCACAAATATTTGCAT 1139 Query 33750 AGT 33752 || Sbjct 1138 CGT 1136 >seq238832 Length=2299 Score = 123 bits (136), Expect = 2e-23 Identities = 173/239 (72%), Gaps = 4/239 (2%) Strand=Plus/Minus Query 33512 TAAAATCGTCACCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGT 33571 |||||| | ||| |||| | |||||| || ||||||| ||| |||||||| || | Sbjct 1441 TAAAAT--TAACCGCCTCGAAGACGTAAAACTAAATGTAAAGTTGATTCTTTTTGAATAT 1384 Query 33572 TGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCT 33631 ||||||| || | ||| ||| | || || |||||||| |||||||| || | || || | Sbjct 1383 TGTAATCAGACAATGTTCGTCCATCTTCTAATTGTTTCCCGGCAAATATAAGTCGTTGTT 1324 Query 33632 GATCTTGCGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCG 33690 | ||| | || | |||||||| || || || || || |||| || | || || Sbjct 1323 GGTCTGGAGGAATTCCTTCTTTATCTTGGATCTT-TGCTTTTACATTTTCTATTGTATCA 1265 Query 33691 CTTGATTCCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 ||||||||||| || | || || |||||||| || | ||||| ||||| |||||||| Sbjct 1264 CTTGATTCCACTTCTAATGTAATTGTTTTACCAGTGAGAGTTTTAACAAAAATCTGCAT 1206 Score = 118 bits (130), Expect = 7e-22 Identities = 174/243 (72%), Gaps = 4/243 (2%) Strand=Plus/Minus Query 33513 AAAATCGTCA--CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATG 33570 |||||| || ||||| | || ||||| || ||||||| ||| || ||||| || Sbjct 1216 AAAATCTGCATTCCACCACGTAATCGTAAAACTAAATGTAAAGTTGATTCCTTTTGGATA 1157 Query 33571 TTGTAATCGGAGAGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGC 33630 |||||||| || | ||| ||| | || || |||||||| || |||||||| | || || Sbjct 1156 TTGTAATCAGACAATGTTCGTCCATCTTCTAATTGTTTCCCAGCAAAAATAAGTCGTTGT 1097 Query 33631 TGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTCACG-GTGTC 33689 |||||| | || | ||||| || || || || || || |||| ||| ||||| Sbjct 1096 TGATCTGGAGGAATTCCTTCCTTATCTTGGATCTT-TGCTTTTACATTTTCAATTGTGTC 1038 Query 33690 GCTTGATTCCACGTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 ||||||||| || |||| || || || ||||| || | ||||| ||||| || ||||| Sbjct 1037 GCTTGATTCGACTTCAAGAGTTATAGTCTTACCAGTAAGTGTTTTCACAAATATTTGCAT 978 Query 33750 AGT 33752 || Sbjct 977 CGT 975 >seq504844 Length=3026 Score = 107 bits (118), Expect = 1e-18 Identities = 162/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 33523 CCACCTCTCAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAG 33582 || |||| || ||||| || ||||||| ||| |||||||| || |||||||| || Sbjct 1531 CCTCCTCGTAATCGTAAAACTAAATGTAAAGTTGATTCTTTTTGAATATTGTAATCAGAT 1590 Query 33583 AGTGTGCGTTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGC 33642 | ||| || | || |||||||||||||| ||||| || | || || |||||| | || Sbjct 1591 AATGTTCGGCCATCTTCCAATTGTTTTCCAGCAAATATAAGTCGTTGTTGATCTGGTGGA 1650 Query 33643 ACACCTTCTTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCAC 33701 | ||||||| || | || || || || | || | || || |||||||| || Sbjct 1651 ATTCCTTCTTCATCTTGTACCTT-TGCTTTGACGTTTTCTATTGTATCACTTGATTCAAC 1709 Query 33702 GTCAACCGTGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 |||| ||||| ||||| || || | ||||| ||||| || ||||| Sbjct 1710 TTCAATAGTGATAGTTTTCCCAGTAAGTGTTTTAACAAAAATTTGCAT 1757 >seq231077 Length=1080 Score = 105 bits (116), Expect = 4e-18 Identities = 157/220 (71%), Gaps = 2/220 (1%) Strand=Plus/Minus Query 33531 CAAACGTAACACCAAATGTAGAGTGCTCTCTTTTTGTATGTTGTAATCGGAGAGTGTGCG 33590 ||| |||||||||||||||| ||| |||||||| || || ||||| | | ||| || Sbjct 589 CAATCGTAACACCAAATGTAAAGTTGATTCTTTTTGAATATTATAATCAGGTAATGTTCG 530 Query 33591 TTCGTCGTCCAATTGTTTTCCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTC 33650 | || ||||||||||| || || ||||| | || || ||||| || | ||||| Sbjct 529 ACCATCTTCCAATTGTTTCCCAGCGAAAATAAGTCGTTGTTGATCAGAAGGAATTCCTTC 470 Query 33651 TTTGTCGGCAATTTTCTGTTTCAACATAGTC-ACGGTGTCGCTTGATTCCACGTCAACCG 33709 ||| || | ||||| || || |||| || | || || |||| ||| || || | | Sbjct 469 TTTATCTTCGATTTT-TGCTTTTACATTTTCAATAGTATCACTTGCTTCAACTTCTAAAG 411 Query 33710 TGATCGTTTTACCTGTTAACGTTTTTACAAAGATCTGCAT 33749 |||| || || || ||||| ||||| ||||| || | ||| Sbjct 410 TGATAGTCTTGCCAGTTAATGTTTTCACAAAAATTTCCAT 371 >seq600562 Length=4425 Score = 98.7 bits (108), Expect = 6e-16 Identities = 108/141 (77%), Gaps = 2/141 (1%) Strand=Plus/Minus Query 33610 CCGGCAAAAATCAAACGCTGCTGATCTTGCGGCACACCTTCTTTGTCGGCAATTTTCTGT 33669 || ||||||||||| || ||||||||| | || | |||||||||||| ||||| || Sbjct 4425 CCAGCAAAAATCAATCGTTGCTGATCTGGAGGAATACCTTCTTTGTCCTGGATTTT-TGC 4367 Query 33670 TTCAACATAGTCACG-GTGTCGCTTGATTCCACGTCAACCGTGATCGTTTTACCTGTTAA 33728 || |||| ||| || |||||||||||||| || | || || ||||| || |||| Sbjct 4366 TTTGACATTTTCAATAGTATCGCTTGATTCCACCTCCAATGTAATGGTTTTTCCAGTTAG 4307 Query 33729 CGTTTTTACAAAGATCTGCAT 33749 ||||| ||||| |||||||| Sbjct 4306 AGTTTTGACAAATATCTGCAT 4286 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 326105680548480