Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dugesia_20japonica_20[genbank_20GCA_5F001938525.1_202017-01-06] 648,594 sequences; 854,187,087 total letters Query= NC_027778.1 Length=124244 Score E Sequences producing significant alignments: (Bits) Value seq610803 138 9e-28 seq629926 129 5e-25 seq241527 109 4e-19 seq623066 102 6e-17 seq105517 98.7 8e-16 >seq610803 Length=1907 Score = 138 bits (152), Expect = 9e-28 Identities = 381/590 (65%), Gaps = 53/590 (9%) Strand=Plus/Plus Query 43760 TCATTTTGGACAGCAGAAGAAGTTGATTTGACTAAAGACTTAGCACATTGGATTGCATTA 43819 || |||||||| | | | ||||||||||| | ||||| || || ||||||| ||| Sbjct 695 TCGTTTTGGACGGTAAATGAAGTTGATTTATCAAAAGATTTTGCTCATTGGAAAAAGTTA 754 Query 43820 AAACCACAAGAAAAACATTTTATATCTTTGGTTTTGGCGTTTTTTGCTGCGAGCGACGGG 43879 | | | | ||| ||||||| || ||| | ||||||||||| || || || || Sbjct 755 ACAGAAAATGAACGTTATTTTATTTCGCATGTTCTTGCGTTTTTTGCAGCTAGTGATGGA 814 Query 43880 ATAGTCAATGAAAATTTGGTTAGTCGGTTTGCGCAAGAAGTTCAATTACCAGAAGCACGA 43939 ||||| || |||||| | || |||||| ||||||||| | | || ||||| ||| Sbjct 815 ATAGTAAACGAAAATCTCGTGGAACGGTTTATTCAAGAAGTTAAGATTCCCGAAGC-CGA 873 Query 43940 TG-TTTTTATGGGTTTCAAATTGCCATAGAAAATATTCATTCGGAAATGTACAGTCTTCT 43998 | |||||| | |||||||||||||| ||||| ||||| || ||||||||| | | Sbjct 874 AGCATTTTATAGTTTTCAAATTGCCATTGAAAACATTCACTCAGAAATGTACTCCTTATT 933 Query 43999 GATAGATACGTACATCAAAGATGGGCACGAGAAG-------------------------- 44032 || ||| | || |||| ||| | | | ||| Sbjct 934 AATCGATTCATATATCACCGATAGTAAAGCCAAGTAAATGCTTAAATGAATGTTTTGTTT 993 Query 44033 ----------------CATCGAT----TGTTTAATGCGATAGAAACAGTACC-TGCGATT 44071 || ||| | |||||||| || |||||| | || || | || Sbjct 994 GTGATAAAATATTTTACAGGGATAACTTATTTAATGCTATTGAAACAATGCCATGTG-TT 1052 Query 44072 AAACATAAAGCAGACTGGGCCCTTAAATGGATAAATTCAAATGATTC---TTTTGGAGAA 44128 || | ||||| | ||||| | ||||||||| || | || ||| ||| Sbjct 1053 CAAAAGAAAGCCCAATGGGCTTTACGTTGGATAAATGATAAGCACTCAAATTTCGGAACT 1112 Query 44129 CGACTTGTCGCGTTTGCAGTTGTGGAAGGCATTTTCTTTTCAGGATCGTTTGCGGCCATA 44188 ||| | || || || |||| || ||||| || || ||| ||| ||||| | ||| Sbjct 1113 CGAGTAGTTGCTTTCGCAGCCGTTGAAGGGATATTTTTTAGTGGAAGTTTTGCATCAATA 1172 Query 44189 TTTTGGTTAAAGAAACGAGGTTTGATGCCTGGGTTGACGTTTTCAAATGAGTTAATAAGT 44248 ||||||||||| ||||| || |||||||| || ||| ||||| || || ||||| || Sbjct 1173 TTTTGGTTAAAAAAACGTGGATTGATGCCGGGATTGTCGTTTAGCAACGAATTAATTAGC 1232 Query 44249 CGTGATGAAGGCTTACATTGCGATTTTGCTTGCTTGTTACTTGGATATCT 44298 | |||||||| | ||||| |||||||| || ||| | || |||||| Sbjct 1233 AGAGATGAAGGTCTTCATTGTGATTTTGCCTGTTTGATGTTTAAATATCT 1282 >seq629926 Length=3335 Score = 129 bits (142), Expect = 5e-25 Identities = 194/276 (70%), Gaps = 0/276 (0%) Strand=Plus/Plus Query 43714 AATTCAATATCATGACATATGGCAAATGTACAAAAAAGCACAGGCGTCATTTTGGACAGC 43773 |||| ||| | ||||||| ||| | |||| || || || | ||||||||| | | Sbjct 2053 AATTGAATTTAATGACATTTGGGATATGTTTAATAAGGCTAGATCTTCATTTTGGTCTGT 2112 Query 43774 AGAAGAAGTTGATTTGACTAAAGACTTAGCACATTGGATTGCATTAAAACCACAAGAAAA 43833 | | ||||||||||| | ||||| || || |||||| | || | | | | ||| Sbjct 2113 AAATGAAGTTGATTTATCCAAAGATTTTGCTGATTGGAATAACTTGACAGAAAATGAACG 2172 Query 43834 ACATTTTATATCTTTGGTTTTGGCGTTTTTTGCTGCGAGCGACGGGATAGTCAATGAAAA 43893 | ||||||| || ||| | |||||||||| || || || || ||||| |||||||| Sbjct 2173 ATATTTTATTTCACACGTTCTCTCGTTTTTTGCAGCTAGTGATGGAATAGTGAATGAAAA 2232 Query 43894 TTTGGTTAGTCGGTTTGCGCAAGAAGTTCAATTACCAGAAGCACGATGTTTTTATGGGTT 43953 | | || | | ||| |||||| || || | || ||||| | ||||| | || Sbjct 2233 TCTTGTAGGAAGATTTATCCAAGAAATTAAAATTCCTGAAGCTGAAGCATTTTACAGTTT 2292 Query 43954 TCAAATTGCCATAGAAAATATTCATTCGGAAATGTA 43989 ||||||||| || || |||||||||||||||||||| Sbjct 2293 TCAAATTGCTATTGAGAATATTCATTCGGAAATGTA 2328 Score = 109 bits (120), Expect = 4e-19 Identities = 187/266 (70%), Gaps = 9/266 (3%) Strand=Plus/Plus Query 44039 TTGTTTAATGCGATAGAAACAGTACC-TGCGATTAAACATAAAGCAGACTGGGCCCTTAA 44097 ||||||||||| || |||||| | || || | | | | | ||||| | ||||| | | Sbjct 2428 TTGTTTAATGCTATTGAAACAATGCCATGTGTTCATAAA-AAAGCCCAATGGGCGTTACA 2486 Query 44098 ATGGATAAATTCAAATGATTC---TTTTGGAGAACGACTTGTCGCGTTTGCAGTTGTGGA 44154 ||||| ||| || | || ||||||| ||| |||| || ||||| | ||| || Sbjct 2487 TTGGATTAATGATAAACAGTCAAATTTTGGAATTCGAATTGTTGCTTTTGCTGCTGTTGA 2546 Query 44155 AGGCATTTTCTTTTCAG--GATCGTTTGCGGCCATATTTTGGTTAAAGAAACGAGGTTTG 44212 ||| || || |||||| || |||||| | ||||||||||| || ||||| || ||| Sbjct 2547 AGGGATATT--TTTCAGTGGAAGTTTTGCGTCAATATTTTGGTTGAAAAAACGTGGATTG 2604 Query 44213 ATGCCTGGGTTGACGTTTTCAAATGAGTTAATAAGTCGTGATGAAGGCTTACATTGCGAT 44272 ||||| || || | ||| || || || || || | |||||||| | ||||| ||| Sbjct 2605 ATGCCGGGATTATCTTTTAGTAACGAATTGATTAGCAGAGATGAAGGTCTTCATTGTGAT 2664 Query 44273 TTTGCTTGCTTGTTACTTGGATATCT 44298 ||||| || ||| | || |||||| Sbjct 2665 TTTGCCTGTTTGATGTTTAAATATCT 2690 >seq241527 Length=769 Score = 109 bits (120), Expect = 4e-19 Identities = 110/143 (77%), Gaps = 0/143 (0%) Strand=Plus/Plus Query 19600 TCTGGTGTAAATGGAGTACATGACACTGTTGTCAATCAACTCCTGTCAAAATTAGACGGT 19659 ||||| | | || ||| || |||||||||||||||||||| |||||||| | || ||| Sbjct 190 TCTGGAGGATCTGCAGTGCAAGACACTGTTGTCAATCAACTGTTGTCAAAAATGGATGGT 249 Query 19660 GTTAACCAACTGAATAATATTTTAGTTATTGGCATGACTAATAGACTGGAATTAATAGAC 19719 ||| | || || ||||||||| | |||||||||||||| ||| ||| || | ||||| Sbjct 250 GTTGAACAGCTAAATAATATTCTCGTTATTGGCATGACAAATCGACGAGATATGATAGAT 309 Query 19720 AGCGCCTTATTACGACCCGGTCG 19742 || || || ||||| ||||| Sbjct 310 GAAGCATTGTTGCGACCTGGTCG 332 >seq623066 Length=2774 Score = 102 bits (112), Expect = 6e-17 Identities = 399/623 (64%), Gaps = 51/623 (8%) Strand=Plus/Plus Query 43725 ATGACATATGGCAAATGTACAAAAAAGCACAGGCGTCATTTTGGACAGCAGAAGAAGTTG 43784 |||| || ||| |||||| || || || | || |||||||| | | | | ||| | Sbjct 986 ATGATATTTGGGAAATGTTTAACAAGGCTAGATCATCGTTTTGGACGGTAAATGGAGTCG 1045 Query 43785 ATTTGACTAAAGACTTAGCACATTGGATTGCATTAAAACCACAAGAAAAACATTTTATAT 43844 |||| | ||||| || || ||||||| || | | | | ||| | ||||| | Sbjct 1046 ATTTATCAAAAGATTTTGCTCATTGGAAAAAGTTTACAGAAAATGAACGTTAATTTATTT 1105 Query 43845 CTTTGGTTTTGGCGTTTTTTGCTGCGAGCGACGGGATAGTCAATGAAAATTTGGTTAGTC 43904 | ||| | ||||||||||| | || || || ||||| || |||||| | | Sbjct 1106 CGCATGTTCTTGCGTTTTTTGCATCTAGTGATGGAATAGTAAACGAAAATCTCCTGGAAT 1165 Query 43905 GGTTTGCGCAAGAAGTTCAATTACCAGAAGCACGATGT-TTTTATGGGTTTCAAATTGCC 43963 ||||| ||||||||| | | || ||||| ||| || |||||| | ||||||||||| Sbjct 1166 GGTTTATTCAAGAAGTTTAGATTCCTGAAGC-CGAAGTATTTTATAGTTTTCAAATTGCT 1224 Query 43964 ATAGAAAATATTCATTCGGAAATGTAC--------AGTCTTCTGATAGAT-AC-----GT 44009 | ||||| ||||| || ||||||||| | || || ||| || || || Sbjct 1225 AATGAAAACATTCACTCAGAAATGTACTCCTTATTAATCGACTCATATATCACAGATAGT 1284 Query 44010 ACA-TCAAAGATGGGCAC----------------GAGAA------------GCATCGATT 44040 | | |||| | ||| || || | || || Sbjct 1285 AAAGTCAAGTAAAGGCTTAAATAAATGATTTTGTGATAAAATATTTTAAGGGGATAACTT 1344 Query 44041 GTTTAATGCGATAGAAACAGTACC-TGCGATTAAACATAAAGCAGACTGGGCCCTTAAAT 44099 |||||||| || |||||| | || || | | ||| | ||||| | ||| | ||| | Sbjct 1345 ATTTAATGCTATTGAAACAATGCCATGTGCTCAAA-AGAAAGCCCAGTGGAGCTTTACGT 1403 Query 44100 -GGATAAATTCAAATGATTCTT-TTGGAGAAC--GACTTGTCGCGTTTGCAGTTGTGGAA 44155 |||||||| || | || || ||||| || | || || || |||||||| ||| Sbjct 1404 TGGATAAATGATAAGTACTCAAATTTCAGAACTCGAGTAGTTGCTTTCGCAGTTGTTGAA 1463 Query 44156 GGCATTTTCTTTTCAGGATCGTTTGCGGCCATATTTTGGTTAAAGAAACGAGGTTTGATG 44215 || || || ||| ||| ||||| || ||||||||||| ||||| || |||||| Sbjct 1464 GGGATATTTTTTAGTGGAAGTTTTGCATTAATGTTTTGGTTAAAAAAACGTGGATTGATG 1523 Query 44216 CCTGGGTTGACGTTTTCAAATGAGTTAATAAGTCGTGATGAAGGCTTACATTGCGATTTT 44275 || || ||| | ||| || || ||||| || | |||||||| | ||||| |||||| Sbjct 1524 CCGGGATTGTCATTTAGCAACGAATTAATTAGCAGAGATGAAGGTCTTCATTGTGATTTT 1583 Query 44276 GCTTGCTTGTTACTTGGATATCT 44298 || || ||| | || |||||| Sbjct 1584 GCCTGTTTGATGTTTAAATATCT 1606 >seq105517 Length=321 Score = 98.7 bits (108), Expect = 8e-16 Identities = 182/264 (69%), Gaps = 5/264 (2%) Strand=Plus/Plus Query 44039 TTGTTTAATGCGATAGAAACAGTACC-TGCGATTAAACATAAAGCAGACTGGGCCCTTAA 44097 || |||||||| || |||| | | || || | | ||| | ||| | | ||||| | Sbjct 56 TTATTTAATGCTATTGAAATAATGCCATGTGCTCAAA-AGAAATCCCAGTGGGCTTTACG 114 Query 44098 ATGGATAAATTCAAATGATTC---TTTTGGAGAACGACTTGTCGCGTTTGCAGTTGTGGA 44154 ||||||||| || | || ||| ||| ||| | || || || |||| ||| || Sbjct 115 TTGGATAAATGATAAGTACTCCAATTTCGGAACTCGAGTAGTTGCTTTCGCAGCTGTTGA 174 Query 44155 AGGCATTTTCTTTTCAGGATCGTTTGCGGCCATATTTTGGTTAAAGAAACGAGGTTTGAT 44214 ||| || || ||| ||| ||||| || ||||||||||| ||||| || ||||| Sbjct 175 AGGGATATTTTTTAGTGGAAGTTTTGCATTAATTTTTTGGTTAAAAAAACGTGGATTGAT 234 Query 44215 GCCTGGGTTGACGTTTTCAAATGAGTTAATAAGTCGTGATGAAGGCTTACATTGCGATTT 44274 ||| || ||| | ||| || || ||||| ||| | |||||||| | ||||| ||||| Sbjct 235 GCCGGGATTGTCTTTTAGCAACGAATTAATTAGTAGAGATGAAGGTCTTCATTGTGATTT 294 Query 44275 TGCTTGCTTGTTACTTGGATATCT 44298 ||| || ||| | || |||||| Sbjct 295 TGCCTGTTTGATGTTTAAATATCT 318 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 394314213906970