Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dugesia_20japonica_20[genbank_20GCA_5F001938525.1_202017-01-06] 648,594 sequences; 854,187,087 total letters Query= NC_029304.1 Length=111246 Score E Sequences producing significant alignments: (Bits) Value seq504844 114 9e-21 seq375912 114 9e-21 seq247457 114 9e-21 seq238832 114 9e-21 seq22558 95.1 9e-15 seq279238 87.8 1e-12 seq231077 87.8 1e-12 >seq504844 Length=3026 Score = 114 bits (126), Expect = 9e-21 Identities = 162/228 (71%), Gaps = 0/228 (0%) Strand=Plus/Minus Query 27789 AATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCAC 27848 ||||||||||||||| ||||| |||||||||||| ||| || ||||| || ||| | Sbjct 1758 AATGCAAATTTTTGTTAAAACACTTACTGGGAAAACTATCACTATTGAAGTTGAATCAAG 1699 Query 27849 CGACGATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGCA 27908 || || || |||||| ||| || || ||||||| |||| || || Sbjct 1698 TGATACAATAGAAAACGTCAAAGCAAAGGTACAAGATGAAGAAGGAATTCCACCAGATCA 1639 Query 27909 GCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACAA 27968 ||||| | || ||||| |||||||||||||| || | || | || || |||||||| Sbjct 1638 ACAACGACTTATATTTGCTGGAAAACAATTGGAAGATGGCCGAACATTATCTGATTACAA 1579 Query 27969 CATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGG 28016 || |||||||| ||||| ||||| ||||| || || || || || Sbjct 1578 TATTCAAAAAGAATCAACTTTACATTTAGTTTTACGATTACGAGGAGG 1531 >seq375912 Length=2531 Score = 114 bits (126), Expect = 9e-21 Identities = 164/229 (72%), Gaps = 4/229 (2%) Strand=Plus/Minus Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849 |||||||| ||||||||||| |||||||| || ||| || |||| |||||| | | Sbjct 1762 ATGCAAATATTTGTGAAAACACTTACTGGTAAGACTATAACTCTTGAAGTCGAATCAAGC 1703 Query 27850 G--ACGATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGC 27907 | || || | ||| || ||| ||| || || || ||||| |||| || | Sbjct 1702 GACACAATTGAAAAT--GTAAAAGCAAAGATCCAAGATAAGGAAGGAATTCCTCCAGATC 1645 Query 27908 AGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACA 27967 | ||||| | |||||||| || |||||||| || || | ||| | ||||| ||||||| Sbjct 1644 AACAACGACTTATTTTTGCTGGGAAACAATTAGAAGATGGACGAACATTGTCTGATTACA 1585 Query 27968 ACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGG 28016 | |||||||| || ||||| ||||| ||||| || || ||||| || Sbjct 1584 ATATCCAAAAGGAATCAACTTTACATTTAGTTTTACGATTACGTGGTGG 1536 >seq247457 Length=2460 Score = 114 bits (126), Expect = 9e-21 Identities = 164/229 (72%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849 |||||||| ||||||||||| |||||||| || ||| || |||| |||||| | | Sbjct 1139 ATGCAAATATTTGTGAAAACACTTACTGGTAAGACTATAACTCTTGAAGTCGAATCAAGC 1198 Query 27850 G--ACGATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGC 27907 | || || | ||| || ||| ||| || || || ||||| |||| || | Sbjct 1199 GACACAATTGAAAAT--GTAAAAGCAAAGATCCAAGATAAGGAAGGAATTCCTCCAGATC 1256 Query 27908 AGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACA 27967 | ||||| | |||||||| || |||||||| || || | ||| | ||||| ||||||| Sbjct 1257 AACAACGACTTATTTTTGCTGGGAAACAATTAGAAGATGGACGAACATTGTCTGATTACA 1316 Query 27968 ACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGG 28016 | |||||||| || ||||| ||||| ||||| || || ||||| || Sbjct 1317 ATATCCAAAAGGAATCAACTTTACATTTAGTTTTACGATTACGTGGTGG 1365 >seq238832 Length=2299 Score = 114 bits (126), Expect = 9e-21 Identities = 164/229 (72%), Gaps = 4/229 (2%) Strand=Plus/Plus Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849 |||||||| ||||||||||| |||||||| || ||| || |||| |||||| | | Sbjct 978 ATGCAAATATTTGTGAAAACACTTACTGGTAAGACTATAACTCTTGAAGTCGAATCAAGC 1037 Query 27850 G--ACGATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGC 27907 | || || | ||| || ||| ||| || || || ||||| |||| || | Sbjct 1038 GACACAATTGAAAAT--GTAAAAGCAAAGATCCAAGATAAGGAAGGAATTCCTCCAGATC 1095 Query 27908 AGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACA 27967 | ||||| | |||||||| || |||||||| || || | ||| | ||||| ||||||| Sbjct 1096 AACAACGACTTATTTTTGCTGGGAAACAATTAGAAGATGGACGAACATTGTCTGATTACA 1155 Query 27968 ACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGGCGG 28016 | |||||||| || ||||| ||||| ||||| || || ||||| || Sbjct 1156 ATATCCAAAAGGAATCAACTTTACATTTAGTTTTACGATTACGTGGTGG 1204 >seq22558 Length=224 Score = 95.1 bits (104), Expect = 9e-15 Identities = 112/152 (74%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 27865 GTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGCAGCAACGGTTAATTTTT 27924 || ||| |||||| || |||||||| |||| || |||||||| | ||||| Sbjct 1 GTAAAAGCAAAAATCCAAGATAAAGAAGGAATTCCTCCTGATCAGCAACGACTTATTTTC 60 Query 27925 GCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACAACATCCAAAAAGAGAGC 27984 || || |||||||| || || | ||| | ||||| |||||||| |||||||| || Sbjct 61 GCTGGGAAACAATTAGAAGATGGACGAACATTGTCTGATTACAATATCCAAAAGGAATCA 120 Query 27985 ACTTTGCATTTGGTTTTGCGTTTGCGTGGCGG 28016 ||||| ||||||||||| || || ||||| || Sbjct 121 ACTTTACATTTGGTTTTACGATTACGTGGTGG 152 >seq279238 Length=1756 Score = 87.8 bits (96), Expect = 1e-12 Identities = 155/224 (69%), Gaps = 4/224 (2%) Strand=Plus/Plus Query 27786 TAAAATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAG 27845 ||| ||||| || ||||| ||||| | || || ||| ||| ||| | || |||||| Sbjct 1177 TAAGATGCAGATATTTGTTAAAACATTAACAGGAAAAACTATAACATTAGAAGTCGAATC 1236 Query 27846 CACCGA--CGATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATG 27903 | || | || | ||| || ||| ||||| || || |||||| |||| Sbjct 1237 ATCTGATTCTATCGAAAAT--GTTAAATCTAAAATTCAAGATAAGGAAGGTATTCCTCCA 1294 Query 27904 GAGCAGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGAT 27963 || |||||| | || || ||||| || || |||||||| || | | | ||||| ||| Sbjct 1295 GATCAGCAAAGATTGATATTTGCTGGTAAGCAATTGGAAGATGGTAGAACTTTGTCTGAT 1354 Query 27964 TACAACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTT 28007 || ||||| ||||| || |||||||||||||| || ||||| Sbjct 1355 TATAACATTCAAAAGGAATCAACTTTGCATTTGGTCTTACGTTT 1398 >seq231077 Length=1080 Score = 87.8 bits (96), Expect = 1e-12 Identities = 156/226 (69%), Gaps = 4/226 (2%) Strand=Plus/Plus Query 27790 ATGCAAATTTTTGTGAAAACTCTTACTGGGAAATGTATTACAATTGATGTCGAAAGCACC 27849 ||| |||||||||||||||| | ||||| || ||| || | || || ||| | Sbjct 371 ATGGAAATTTTTGTGAAAACATTAACTGGCAAGACTATCACTTTAGAAGTTGAAGCAAGT 430 Query 27850 GA--CGATGTACAATCGGTCAAACAAAAAATAGCCGACAAAGAAGGTGTTCCGATGGAGC 27907 || | || | ||| || ||| |||||| | || |||||||| |||| || | Sbjct 431 GATACTATTGAAAAT--GTAAAAGCAAAAATCGAAGATAAAGAAGGAATTCCTTCTGATC 488 Query 27908 AGCAACGGTTAATTTTTGCCGGAAAACAATTGGACGACGAACGCAGCTTGTCCGATTACA 27967 | ||||| | ||||| || || ||||||||||| || | || | || | ||||| | Sbjct 489 AACAACGACTTATTTTCGCTGGGAAACAATTGGAAGATGGTCGAACATTACCTGATTATA 548 Query 27968 ACATCCAAAAAGAGAGCACTTTGCATTTGGTTTTGCGTTTGCGTGG 28013 | || |||||||| ||||| |||||||| || || |||| ||| Sbjct 549 ATATTCAAAAAGAATCAACTTTACATTTGGTGTTACGATTGCCTGG 594 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 353049400474638