Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dugesia_20japonica_20[genbank_20GCA_5F001938525.1_202017-01-06] 648,594 sequences; 854,187,087 total letters Query= NC_029996.1 Length=134272 Score E Sequences producing significant alignments: (Bits) Value seq375912 91.5 1e-13 seq247457 91.5 1e-13 seq238832 91.5 1e-13 seq231077 82.4 7e-11 >seq375912 Length=2531 Score = 91.5 bits (100), Expect = 1e-13 Identities = 149/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 39070 CGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCG 39129 ||||| || ||||||| || |||||||| ||||| ||||| | | ||||||| | Sbjct 1320 CGTAAAACTAAATGTAAAGTTGATTCTTTTTGAATATTGTAATCAGACAATGTTCGTCCA 1379 Query 39130 TCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTG 39189 || || | ||||| || ||||||||||| || || ||||| | || | | ||||| Sbjct 1380 TCTTCTAATTGTTTCCCGGCAAATATAAGTCGTTGTTGGTCTGGAGGAATTCCTTCTTTA 1439 Query 39190 TCCATGATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATA 39249 || ||| || ||| | | | | ||||| || || ||||| || | || || Sbjct 1440 TCTTGGATCTTTGCTTTTACATTTTCTATTGTATCACTTGATTCCACTTCTAATGTAATT 1499 Query 39250 CTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 |||| || || || ||||||||||| || ||||| Sbjct 1500 GTTTTACCAGTGAGAGTTTTAACAAAAATCTGCAT 1534 >seq247457 Length=2460 Score = 91.5 bits (100), Expect = 1e-13 Identities = 149/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 39070 CGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCG 39129 ||||| || ||||||| || |||||||| ||||| ||||| | | ||||||| | Sbjct 1581 CGTAAAACTAAATGTAAAGTTGATTCTTTTTGAATATTGTAATCAGACAATGTTCGTCCA 1522 Query 39130 TCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTG 39189 || || | ||||| || ||||||||||| || || ||||| | || | | ||||| Sbjct 1521 TCTTCTAATTGTTTCCCGGCAAATATAAGTCGTTGTTGGTCTGGAGGAATTCCTTCTTTA 1462 Query 39190 TCCATGATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATA 39249 || ||| || ||| | | | | ||||| || || ||||| || | || || Sbjct 1461 TCTTGGATCTTTGCTTTTACATTTTCTATTGTATCACTTGATTCCACTTCTAATGTAATT 1402 Query 39250 CTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 |||| || || || ||||||||||| || ||||| Sbjct 1401 GTTTTACCAGTGAGAGTTTTAACAAAAATCTGCAT 1367 >seq238832 Length=2299 Score = 91.5 bits (100), Expect = 1e-13 Identities = 149/215 (69%), Gaps = 0/215 (0%) Strand=Plus/Minus Query 39070 CGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGTTCG 39129 ||||| || ||||||| || |||||||| ||||| ||||| | | ||||||| | Sbjct 1420 CGTAAAACTAAATGTAAAGTTGATTCTTTTTGAATATTGTAATCAGACAATGTTCGTCCA 1361 Query 39130 TCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCTTTG 39189 || || | ||||| || ||||||||||| || || ||||| | || | | ||||| Sbjct 1360 TCTTCTAATTGTTTCCCGGCAAATATAAGTCGTTGTTGGTCTGGAGGAATTCCTTCTTTA 1301 Query 39190 TCCATGATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTGATA 39249 || ||| || ||| | | | | ||||| || || ||||| || | || || Sbjct 1300 TCTTGGATCTTTGCTTTTACATTTTCTATTGTATCACTTGATTCCACTTCTAATGTAATT 1241 Query 39250 CTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCAT 39284 |||| || || || ||||||||||| || ||||| Sbjct 1240 GTTTTACCAGTGAGAGTTTTAACAAAAATCTGCAT 1206 >seq231077 Length=1080 Score = 82.4 bits (90), Expect = 7e-11 Identities = 150/220 (68%), Gaps = 0/220 (0%) Strand=Plus/Minus Query 39067 AAGCGTAACACCAAATGTAGCGTGCTCTCTTTTTGTATATTATAATCGGCAAGTGTTCGT 39126 || |||||||||||||||| || |||||||| ||||||||||| | | |||||| Sbjct 588 AATCGTAACACCAAATGTAAAGTTGATTCTTTTTGAATATTATAATCAGGTAATGTTCGA 529 Query 39127 TCGTCATCAAGCTGTTTGCCCGCAAATATAAGACGCTGCTGGTCGGTGGGCACGCTCTCT 39186 | || || | ||||| || || || ||||| || || || || | || | | ||| Sbjct 528 CCATCTTCCAATTGTTTCCCAGCGAAAATAAGTCGTTGTTGATCAGAAGGAATTCCTTCT 469 Query 39187 TTGTCCATGATTTTCTGTTTGAGCGTCGCCACCGTATCGCTCGACTCCACGTCCACCGTG 39246 || || |||||| ||| | | | | ||||| || | || || || | ||| Sbjct 468 TTATCTTCGATTTTTGCTTTTACATTTTCAATAGTATCACTTGCTTCAACTTCTAAAGTG 409 Query 39247 ATACTTTTTCCCGTCAGCGTTTTAACAAAGATTTGCATCT 39286 ||| | || || || | ||||| ||||| |||| ||||| Sbjct 408 ATAGTCTTGCCAGTTAATGTTTTCACAAAAATTTCCATCT 369 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 426150153982322