Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dugesia_20japonica_20[genbank_20GCA_5F001938525.1_202017-01-06] 648,594 sequences; 854,187,087 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq610803 214 2e-50 seq629926 199 3e-46 seq623066 168 6e-37 seq105517 116 3e-21 >seq610803 Length=1907 Score = 214 bits (236), Expect = 2e-50 Identities = 419/621 (67%), Gaps = 60/621 (10%) Strand=Plus/Minus Query 4538 AAACAATAAACACGCAAAATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGA 4597 ||||| ||||| |||||||||||||| | |||||| ||||||||||| | |||||| Sbjct 1274 AAACATCAAACAGGCAAAATCACAATGAAGACCTTCATCTCTGCTAATTAATTCGTTGCT 1215 Query 4598 AAACGTTAATCCGGGCATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCC 4657 ||||| ||||| ||||| || || | ||||| | ||||||||| | ||||| || Sbjct 1214 AAACGACAATCCCGGCATCAATCCACGTTTTTTTAACCAAAATATTGATGCAAAACTTCC 1155 Query 4658 AGAAAAGAATATGCCTTCTACGGCGGCAAACGCTACTAATCGGGACCCGAACGAGCTGGC 4717 | ||| ||||| ||||| ||||| || || || |||| ||| | ||||| | || Sbjct 1154 ACTAAAAAATATCCCTTCAACGGCTGCGAAAGCAACTACTCGAGTTCCGAA--ATTTGAG 1097 Query 4718 T--TTGTCTTTAATCCATTTTAATGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGTG 4775 | || || || ||||| ||| ||||| | ||||| || | ||| || || ||||| Sbjct 1096 TGCTTATCATTTATCCAACGTAAAGCCCATTGGGCTTTCTTTTGAACACATGGCATTGTT 1037 Query 4776 TATATAGCGTTAAATAATTTAC------------TTTTTTCAAA---------------- 4807 | ||||| |||||||| ||| |||| ||| | Sbjct 1036 TCAATAGCATTAAATAAGTTATCCCTGTAAAATATTTTATCACAAACAAAACATTCATTT 977 Query 4808 -----------TGGGTCT--------TGAATATAAGTGTCTATTAGTAGGCTATACATTT 4848 ||| | | ||| |||| | || |||| || | ||||||| Sbjct 976 AAGCATTTACTTGGCTTTACTATCGGTGA-TATATGAATCGATTAATAAGGAGTACATTT 918 Query 4849 CAGAATGTATATTTTCTATAGCAATCTGAAATCCGTAAAA-GCATCTAGCTTCTGTTACT 4907 | || || || ||||| || ||||| ||||| | ||||| || || ||||| | | Sbjct 917 CTGAGTGAATGTTTTCAATGGCAATTTGAAAACTATAAAATGCTTCG-GCTTCGGGAATC 859 Query 4908 TGAACTTCGTTACAAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCACTGGCTGCA 4967 | |||||| | | ||| | ||| || | |||||||||||||| || ||||| |||||| Sbjct 858 TTAACTTCTTGAATAAACCGTTCCACGAGATTTTCGTTTACTATTCCATCACTAGCTGCA 799 Query 4968 AAAAACGCCAAAACATGAGATATAAAGTACTGTTC---GTCAGGCTTAAGTTTTTTCCAG 5024 |||||||| | |||||| || ||||| || |||| || | |||| |||||||| Sbjct 798 AAAAACGCAAGAACATGCGAAATAAAATAACGTTCATTTTCTG--TTAA-CTTTTTCCAA 742 Query 5025 TGGGGCAAATCTTTAGTTAAATCAACTTCTTCAACAGTCCAAAACGACGCTTCCGCTTTT 5084 || | |||||||| | |||||||||||| | || ||||||||||| | | || || Sbjct 741 TGAGCAAAATCTTTTGATAAATCAACTTCATTTACCGTCCAAAACGATGATCTAGCCTTG 682 Query 5085 TTGTACATAGACCAAATATCA 5105 || ||||| |||||||||| Sbjct 681 TTAAACATATCCCAAATATCA 661 >seq629926 Length=3335 Score = 199 bits (220), Expect = 3e-46 Identities = 429/637 (67%), Gaps = 62/637 (10%) Strand=Plus/Minus Query 4525 TTACTAAGTATCCAAACAATAAACACGCAAAATCACAATGCAAACCTTCGTCTCTGCTAA 4584 |||| | ||| ||||| ||||| |||||||||||||| | |||||| |||||||||| Sbjct 2695 TTACCAGATATTTAAACATCAAACAGGCAAAATCACAATGAAGACCTTCATCTCTGCTAA 2636 Query 4585 TCAGTTCGTTAGAAAACGTTAATCCGGGCATTAAACCTCTCTTTTTAAGCCAAAATATAG 4644 ||| ||||||| ||| | |||||| ||||| || || | ||||| | ||||||||| | Sbjct 2635 TCAATTCGTTACTAAAAGATAATCCCGGCATCAATCCACGTTTTTTCAACCAAAATATTG 2576 Query 4645 CGGCAAATGACCCAGAAAAGAATATGCCTTCTACGGCGGCAAACGCTACTAATCGGGACC 4704 ||||| ||| || ||||| ||||| || || ||||| || || | ||| | Sbjct 2575 ACGCAAAACTTCCACTGAAAAATATCCCTTCAACAGCAGCAAAAGCAACAATTCGAATTC 2516 Query 4705 CGAACGAGCTGGC--TTTGTCTTTAATCCATTTTAATGCCCAGTTAGCTTTTTTCTTAAC 4762 | || | || | ||| || |||||||| | ||| ||||| | |||||||| | ||| Sbjct 2515 CAAA--ATTTGACTGTTTATCATTAATCCAATGTAACGCCCATTGGGCTTTTTTATGAAC 2458 Query 4763 GCACGGAATTGTGTATATAGCGTTAAATAATT--------------TACTTTTTTCA--- 4805 || || ||||| | ||||| ||||| || | | ||| | ||| Sbjct 2457 ACATGGCATTGTTTCAATAGCATTAAACAAGTTGTTCCTGTTGAAATTCTTATATCATAG 2398 Query 4806 ---------AATGGGT--CTTGAATA-TAAGTGTC--TAT---TA--GTAGG-------- 4838 |||| | ||| ||| | ||| || ||| || ||||| Sbjct 2397 CAAGATACGAATGATTAACTTTCATACTTAGTTTCATTATCGGTAATGTAGGAATCAATT 2338 Query 4839 ------CTATACATTTCAGAATGTATATTTTCTATAGCAATCTGAAATCCGTAAAA-GCA 4891 ||||||||| ||||| ||||| || |||||||| ||||| | |||||| || Sbjct 2337 AATACAGAATACATTTCCGAATGAATATTCTCAATAGCAATTTGAAAACTGTAAAATGCT 2278 Query 4892 TCTAGCTTCTGTTACTTGAACTTCGTTACAAAATCTTTCTACTAAGTTTTCGTTTACTAT 4951 || |||||| | | || || ||| | ||||||| |||| | ||||| || ||||| Sbjct 2277 TC-AGCTTCAGGAATTTTAATTTCTTGGATAAATCTTCCTACAAGATTTTCATTCACTAT 2219 Query 4952 ACCGTCACTGGCTGCAAAAAACGCCAAAACATGAGATATAAAGTACTGTTC---GTCAGG 5008 || ||||| ||||||||||||| | ||| || || ||||| || |||| || | Sbjct 2218 TCCATCACTAGCTGCAAAAAACGAGAGAACGTGTGAAATAAAATATCGTTCATTTTCTG- 2160 Query 5009 CTTAAGTTTTTTCCAGTGGGGCAAATCTTTAGTTAAATCAACTTCTTCAACAGTCCAAAA 5068 | ||| || ||||| | | |||||||| | |||||||||||| | |||| |||||| Sbjct 2159 -TCAAG-TTATTCCAATCAGCAAAATCTTTGGATAAATCAACTTCATTTACAGACCAAAA 2102 Query 5069 CGACGCTTCCGCTTTTTTGTACATAGACCAAATATCA 5105 || | | || || || ||||| |||||| ||| Sbjct 2101 TGAAGATCTAGCCTTATTAAACATATCCCAAATGTCA 2065 >seq623066 Length=2774 Score = 168 bits (186), Expect = 6e-37 Identities = 403/614 (66%), Gaps = 48/614 (8%) Strand=Plus/Minus Query 4538 AAACAATAAACACGCAAAATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGA 4597 ||||| ||||| |||||||||||||| | |||||| ||||||||||| | |||||| Sbjct 1598 AAACATCAAACAGGCAAAATCACAATGAAGACCTTCATCTCTGCTAATTAATTCGTTGCT 1539 Query 4598 AAACGTTAATCCGGGCATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCC 4657 ||| | ||||| ||||| || || | ||||| | |||||| || ||||| || Sbjct 1538 AAATGACAATCCCGGCATCAATCCACGTTTTTTTAACCAAAACATTAATGCAAAACTTCC 1479 Query 4658 AGAAAAGAATATGCCTTCTACGGCGGCAAACGCTACTAATCGGGACCCGAACGAGCTGGC 4717 | ||| ||||| ||||| || | || || || |||| ||| | | ||| | || Sbjct 1478 ACTAAAAAATATCCCTTCAACAACTGCGAAAGCAACTACTCGAGTTCTGAA--ATTTGAG 1421 Query 4718 T--TTGTCTTTAATCCATTTTAATGC-CCAGTTAGCTTTTTTCTTAACGCACGGAATTGT 4774 | || || || ||||| ||| || ||| | ||||| || | | | || || ||||| Sbjct 1420 TACTTATCATTTATCCAACGTAAAGCTCCACTGGGCTTTCTTTTGAGCACATGGCATTGT 1361 Query 4775 GTATATAGCGTTAAATAATTTAC------------TTTTTTCA---AATGGGT------- 4812 | ||||| |||||||| ||| |||| ||| ||| | Sbjct 1360 TTCAATAGCATTAAATAAGTTATCCCCTTAAAATATTTTATCACAAAATCATTTATTTAA 1301 Query 4813 -------CTTGA--------------ATATAAGTGTCTATTAGTAGGCTATACATTTCAG 4851 ||||| ||||| | ||| |||| || | |||||||| | Sbjct 1300 GCCTTTACTTGACTTTACTATCTGTGATATATGAGTCGATTAATAAGGAGTACATTTCTG 1241 Query 4852 AATGTATATTTTCTATAGCAATCTGAAATCCGTAAAAGCATCTAGCTTCTGTTACTTGAA 4911 | || || ||||| ||||||| ||||| | ||||| | ||||| | | | || Sbjct 1240 AGTGAATGTTTTCATTAGCAATTTGAAAACTATAAAATACTTCGGCTTCAGGAATCTAAA 1181 Query 4912 CTTCGTTACAAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCACTGGCTGCAAAAA 4971 |||| | | ||| | ||| | | |||||||||||||| || ||||| | |||||||| Sbjct 1180 CTTCTTGAATAAACCATTCCAGGAGATTTTCGTTTACTATTCCATCACTAGATGCAAAAA 1121 Query 4972 ACGCCAAAACATGAGATATAAAGTACTGTTCGTCAGGCTTAAGTTTTTTCCAGTGGGGCA 5031 |||| | |||||| || ||||| || |||| | ||| |||||||| || | | Sbjct 1120 ACGCAAGAACATGCGAAATAAATTAACGTTCATTTTCTGTAAACTTTTTCCAATGAGCAA 1061 Query 5032 AATCTTTAGTTAAATCAACTTCTTCAACAGTCCAAAACGACGCTTCCGCTTTTTTGTACA 5091 ||||||| | |||||| ||| | | || ||||||||||| | | || || || ||| Sbjct 1060 AATCTTTTGATAAATCGACTCCATTTACCGTCCAAAACGATGATCTAGCCTTGTTAAACA 1001 Query 5092 TAGACCAAATATCA 5105 | |||||||||| Sbjct 1000 TTTCCCAAATATCA 987 >seq105517 Length=321 Score = 116 bits (128), Expect = 3e-21 Identities = 181/259 (70%), Gaps = 0/259 (0%) Strand=Plus/Minus Query 4538 AAACAATAAACACGCAAAATCACAATGCAAACCTTCGTCTCTGCTAATCAGTTCGTTAGA 4597 ||||| ||||| |||||||||||||| | |||||| ||||| ||||| | |||||| Sbjct 310 AAACATCAAACAGGCAAAATCACAATGAAGACCTTCATCTCTACTAATTAATTCGTTGCT 251 Query 4598 AAACGTTAATCCGGGCATTAAACCTCTCTTTTTAAGCCAAAATATAGCGGCAAATGACCC 4657 ||| | ||||| ||||| || || | ||||| | |||||| || ||||| || Sbjct 250 AAAAGACAATCCCGGCATCAATCCACGTTTTTTTAACCAAAAAATTAATGCAAAACTTCC 191 Query 4658 AGAAAAGAATATGCCTTCTACGGCGGCAAACGCTACTAATCGGGACCCGAACGAGCTGGC 4717 | ||| ||||| ||||| || || || || || |||| ||| | ||||| | | Sbjct 190 ACTAAAAAATATCCCTTCAACAGCTGCGAAAGCAACTACTCGAGTTCCGAAATTGGAGTA 131 Query 4718 TTTGTCTTTAATCCATTTTAATGCCCAGTTAGCTTTTTTCTTAACGCACGGAATTGTGTA 4777 || || || ||||| ||| ||||| | | ||| || | | | || || ||| | | Sbjct 130 CTTATCATTTATCCAACGTAAAGCCCACTGGGATTTCTTTTGAGCACATGGCATTATTTC 71 Query 4778 TATAGCGTTAAATAATTTA 4796 ||||| |||||||| ||| Sbjct 70 AATAGCATTAAATAAGTTA 52 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 423673884211802