Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Dugesia_20japonica_20[genbank_20GCA_5F001938525.1_202017-01-06] 648,594 sequences; 854,187,087 total letters Query= NC_032111.1 Length=163005 Score E Sequences producing significant alignments: (Bits) Value seq629926 223 4e-53 seq610803 210 2e-49 seq623066 185 9e-42 seq105517 122 9e-23 >seq629926 Length=3335 Score = 223 bits (246), Expect = 4e-53 Identities = 401/590 (68%), Gaps = 56/590 (9%) Strand=Plus/Minus Query 23493 ATACTTAAACAATAAACATGCAAAATCACAATGTAGGCCTTCATCCCTACTAATCAATTC 23552 ||| ||||||| ||||| |||||||||||||| || |||||||| || ||||||||||| Sbjct 2688 ATATTTAAACATCAAACAGGCAAAATCACAATGAAGACCTTCATCTCTGCTAATCAATTC 2629 Query 23553 ATTAGAAAATGTTAATCCTGGCATTAATCCTCGTTTTTTAATCCAAAATATTGCAGCAAA 23612 ||| ||| | |||||| ||||| ||||| |||||||| | ||||||||||| ||||| Sbjct 2628 GTTACTAAAAGATAATCCCGGCATCAATCCACGTTTTTTCAACCAAAATATTGACGCAAA 2569 Query 23613 TGATCCGGAAAAGAAAATACCCTCAACAGCCGCAAAGGCCACAAGACGTGTACCAAATGT 23672 ||| || || || || |||||||| ||||| || |||| || | ||||| | Sbjct 2568 ACTTCCACTGAAAAATATCCCTTCAACAGCAGCAAAAGCAACAATTCGAATTCCAAAATT 2509 Query 23673 TGCATTATAATCAGAAATCCA-------------------tttttttGTCCAATTAGCCT 23713 || | | |||| |||||| ||||| || || | || | Sbjct 2508 TGACTGTTTATCATTAATCCAATGTAACGCCCATTGGGCTTTTTTATGAACACATGGCAT 2449 Query 23714 T----CAATT---TTACACACTCAATTGTTTCAATTG-----CTTTTA--------AGAG 23753 | |||| ||| ||| | ||||| | ||| ||| || ||| Sbjct 2448 TGTTTCAATAGCATTAAACA---AGTTGTTCCTGTTGAAATTCTTATATCATAGCAAGAT 2392 Query 23754 A--AAAGTTT---TTTC---------TTCATTATCTGTTATATATGTATCAATTAGTAAA 23799 | || | || |||| ||||||||| || || || | |||||||| || | Sbjct 2391 ACGAATGATTAACTTTCATACTTAGTTTCATTATCGGTAATGTAGGAATCAATTAATACA 2332 Query 23800 CTATACATTTCAGAATGAATATTTTCAATAGCAATCTGAAACCCATAAAAACATCTAGCT 23859 ||||||||| ||||||||||| ||||||||||| ||||| | ||||| | |||| Sbjct 2331 GAATACATTTCCGAATGAATATTCTCAATAGCAATTTGAAAACTGTAAAATGCTTCAGCT 2272 Query 23860 TCAGACAATTGAACATCATTAAAAAATCTTTTAGCTAAATTTTCGTTAACAATACCATCA 23919 |||| | || || || | | ||||||| | | |||||| || || || |||||| Sbjct 2271 TCAGGAATTTTAATTTCTTGGATAAATCTTCCTACAAGATTTTCATTCACTATTCCATCA 2212 Query 23920 CTAGCAGCAAAGAAAGCAAGAACATATTTTATAAAATGTCTTTCATCAGTTGATAATTTT 23979 ||||| ||||| || | ||||| | | ||||||| || ||||| || || || Sbjct 2211 CTAGCTGCAAAAAACGAGAGAACGTGTGAAATAAAATATCGTTCATTTTCTGTCAAGTTA 2152 Query 23980 TTCCAATCATTAATATCTTTTGATAAATCAACTTCATCAACTGTCCAAAA 24029 ||||||||| || |||||| |||||||||||||||| || | |||||| Sbjct 2151 TTCCAATCAGCAAAATCTTTGGATAAATCAACTTCATTTACAGACCAAAA 2102 >seq610803 Length=1907 Score = 210 bits (232), Expect = 2e-49 Identities = 390/583 (67%), Gaps = 46/583 (8%) Strand=Plus/Minus Query 23493 ATACTTAAACAATAAACATGCAAAATCACAATGTAGGCCTTCATCCCTACTAATCAATTC 23552 ||| ||||||| ||||| |||||||||||||| || |||||||| || ||||| ||||| Sbjct 1280 ATATTTAAACATCAAACAGGCAAAATCACAATGAAGACCTTCATCTCTGCTAATTAATTC 1221 Query 23553 ATTAGAAAATGTTAATCCTGGCATTAATCCTCGTTTTTTAATCCAAAATATTGCAGCAAA 23612 || ||| | ||||| ||||| ||||| |||||||| | ||||||||||| ||||| Sbjct 1220 GTTGCTAAACGACAATCCCGGCATCAATCCACGTTTTTTTAACCAAAATATTGATGCAAA 1161 Query 23613 TGATCCGGAAAAGAAAATACCCTCAACAGCCGCAAAGGCCACAAGACGTGTACCAAATGT 23672 ||| ||| || || || ||||| || || || || || | || || || || | Sbjct 1160 ACTTCCACTAAAAAATATCCCTTCAACGGCTGCGAAAGCAACTACTCGAGTTCCGAAATT 1101 Query 23673 TGCATTATAATCAGAAATCCAtttttttGTCCAATTAGCCTTCAATTTTACACACTCAAT 23732 || | | |||| ||||| | | ||| | || ||| || ||||| || Sbjct 1100 TGAGTGCTTATCATTTATCCAACGTAAAGCCCATTGGGCTTTCTTTTGAACACATGGCAT 1041 Query 23733 TGTTTCAATTGCTTTTAAGAG------------AAAAGTTTTTTC------------TTC 23768 ||||||||| || || || | ||| |||| || ||| Sbjct 1040 TGTTTCAATAGCATTAAATAAGTTATCCCTGTAAAATATTTTATCACAAACAAAACATTC 981 Query 23769 ATT----------------------ATCTGTTATATATGTATCAATTAGTAAACTATACA 23806 ||| ||| || ||||||| ||| |||| ||| |||| Sbjct 980 ATTTAAGCATTTACTTGGCTTTACTATCGGTGATATATGAATCGATTAATAAGGAGTACA 921 Query 23807 TTTCAGAATGAATATTTTCAATAGCAATCTGAAACCCATAAAAACATCTAGCTTCAGACA 23866 |||| || ||||| |||||||| ||||| ||||| | |||||| | ||||| | | Sbjct 920 TTTCTGAGTGAATGTTTTCAATGGCAATTTGAAAACTATAAAATGCTTCGGCTTCGGGAA 861 Query 23867 ATTGAACATCATTAAAAAATCTTTTAGCTAAATTTTCGTTAACAATACCATCACTAGCAG 23926 | ||| || | || ||| | || | | ||||||||| || || ||||||||||| | Sbjct 860 TCTTAACTTCTTGAATAAACCGTTCCACGAGATTTTCGTTTACTATTCCATCACTAGCTG 801 Query 23927 CAAAGAAAGCAAGAACATATTTTATAAAATGTCTTTCATCAGTTGATAATTTTTTCCAAT 23986 |||| || |||||||||| ||||||| | ||||| || ||| |||||||||| Sbjct 800 CAAAAAACGCAAGAACATGCGAAATAAAATAACGTTCATTTTCTGTTAACTTTTTCCAAT 741 Query 23987 CATTAATATCTTTTGATAAATCAACTTCATCAACTGTCCAAAA 24029 | || ||||||||||||||||||||||| || |||||||| Sbjct 740 GAGCAAAATCTTTTGATAAATCAACTTCATTTACCGTCCAAAA 698 >seq623066 Length=2774 Score = 185 bits (204), Expect = 9e-42 Identities = 413/621 (67%), Gaps = 48/621 (8%) Strand=Plus/Minus Query 23493 ATACTTAAACAATAAACATGCAAAATCACAATGTAGGCCTTCATCCCTACTAATCAATTC 23552 ||| ||||||| ||||| |||||||||||||| || |||||||| || ||||| ||||| Sbjct 1604 ATATTTAAACATCAAACAGGCAAAATCACAATGAAGACCTTCATCTCTGCTAATTAATTC 1545 Query 23553 ATTAGAAAATGTTAATCCTGGCATTAATCCTCGTTTTTTAATCCAAAATATTGCAGCAAA 23612 || ||||| ||||| ||||| ||||| |||||||| | |||||| ||| ||||| Sbjct 1544 GTTGCTAAATGACAATCCCGGCATCAATCCACGTTTTTTTAACCAAAACATTAATGCAAA 1485 Query 23613 TGATCCGGAAAAGAAAATACCCTCAACAGCCGCAAAGGCCACAAGACGTGTACCAAATGT 23672 ||| ||| || || || |||||| | || || || || | || || | || | Sbjct 1484 ACTTCCACTAAAAAATATCCCTTCAACAACTGCGAAAGCAACTACTCGAGTTCTGAAATT 1425 Query 23673 TGCATTATAATCAGAAATCCAtttttttG-TCCAATTAGCCTTCAATTTTACACACTCAA 23731 || | | |||| ||||| | | |||| | || ||| || |||| | Sbjct 1424 TGAGTACTTATCATTTATCCAACGTAAAGCTCCACTGGGCTTTCTTTTGAGCACATGGCA 1365 Query 23732 TTGTTTCAATTGCTTT---TAAGAGA-------AAAGTTTTTTCT-------TCATT--- 23771 |||||||||| || || |||| | ||| | |||| | ||||| Sbjct 1364 TTGTTTCAATAGCATTAAATAAGTTATCCCCTTAAAATATTTTATCACAAAATCATTTAT 1305 Query 23772 -----------------------ATCTGTTATATATGTATCAATTAGTAAACTATACATT 23808 |||||| ||||||| || |||| ||| |||||| Sbjct 1304 TTAAGCCTTTACTTGACTTTACTATCTGTGATATATGAGTCGATTAATAAGGAGTACATT 1245 Query 23809 TCAGAATGAATATTTTCAATAGCAATCTGAAACCCATAAAA-ACATCTAGCTTCAGACAA 23867 || || ||||| |||||| ||||||| ||||| | |||||| || || ||||||| | Sbjct 1244 TCTGAGTGAATGTTTTCATTAGCAATTTGAAAACTATAAAATACTTCG-GCTTCAGGAAT 1186 Query 23868 TTGAACATCATTAAAAAATCTTTTAGCTAAATTTTCGTTAACAATACCATCACTAGCAGC 23927 | ||| || | || ||| | || | ||||||||| || || |||||||||| || Sbjct 1185 CTAAACTTCTTGAATAAACCATTCCAGGAGATTTTCGTTTACTATTCCATCACTAGATGC 1126 Query 23928 AAAGAAAGCAAGAACATATTTTATAAAATGTCTTTCATCAGTTGATAATTTTTTCCAATC 23987 ||| || |||||||||| ||||| | | ||||| || || |||||||||| Sbjct 1125 AAAAAACGCAAGAACATGCGAAATAAATTAACGTTCATTTTCTGTAAACTTTTTCCAATG 1066 Query 23988 ATTAATATCTTTTGATAAATCAACTTCATCAACTGTCCAAAAACTTG-CCAAGGCACGCT 24046 | || ||||||||||||||| ||| ||| || |||||||| || | || | | | Sbjct 1065 AGCAAAATCTTTTGATAAATCGACTCCATTTACCGTCCAAAACGATGATCTAGCCTTG-T 1007 Query 24047 TATACATTAGCCAAATATCAT 24067 || ||||| ||||||||||| Sbjct 1006 TAAACATTTCCCAAATATCAT 986 >seq105517 Length=321 Score = 122 bits (134), Expect = 9e-23 Identities = 124/162 (77%), Gaps = 0/162 (0%) Strand=Plus/Minus Query 23493 ATACTTAAACAATAAACATGCAAAATCACAATGTAGGCCTTCATCCCTACTAATCAATTC 23552 ||| ||||||| ||||| |||||||||||||| || |||||||| |||||||| ||||| Sbjct 316 ATATTTAAACATCAAACAGGCAAAATCACAATGAAGACCTTCATCTCTACTAATTAATTC 257 Query 23553 ATTAGAAAATGTTAATCCTGGCATTAATCCTCGTTTTTTAATCCAAAATATTGCAGCAAA 23612 || ||| | ||||| ||||| ||||| |||||||| | |||||| ||| ||||| Sbjct 256 GTTGCTAAAAGACAATCCCGGCATCAATCCACGTTTTTTTAACCAAAAAATTAATGCAAA 197 Query 23613 TGATCCGGAAAAGAAAATACCCTCAACAGCCGCAAAGGCCAC 23654 ||| ||| || || || |||||||| || || || || Sbjct 196 ACTTCCACTAAAAAATATCCCTTCAACAGCTGCGAAAGCAAC 155 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 517260075151600