Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Echinococcus_20granulosus_20[genbank_20GCA_5F000524195.1_202014-01- 28] 957 sequences; 110,837,706 total letters Query= NC_001623.1 Length=133894 Score E Sequences producing significant alignments: (Bits) Value seq907 89.7 4e-13 >seq907 Length=590410 Score = 89.7 bits (98), Expect = 4e-13 Identities = 108/145 (74%), Gaps = 4/145 (3%) Strand=Plus/Minus Query 29046 AAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAACAAAGACTTATCTTTGCGGGCAAA 29105 |||||| |||||||||||| | || |||||| ||| | |||||||| || || || Sbjct 17968 AAAATTCAGGATAAAGAAGGTATACCGCCAGATCAGCAACGGCTTATCTTCGCTGGTAAG 17909 Query 29106 CAACTGGAAGATT--CCAAAACTATGGCCGATTACAATATTCAGAAGGAATCTACTCTTC 29163 ||| | || ||| | || |||| |||| ||||||||||| ||||| || || |||| Sbjct 17908 CAATTAGAGGATGGGCGAACCCTAT--CCGACTACAATATTCAAAAGGAGTCGACACTTC 17851 Query 29164 ACATGGTGTTACGATTACGAGGAGG 29188 || | || || || |||||||||| Sbjct 17850 ACCTTGTTCTAAGACTACGAGGAGG 17826 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 428331004129835