Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Echinococcus_20granulosus_20[genbank_20GCA_5F000524195.1_202014-01- 28] 957 sequences; 110,837,706 total letters Query= NC_002331.1 Length=178733 Score E Sequences producing significant alignments: (Bits) Value seq907 86.0 7e-12 >seq907 Length=590410 Score = 86.0 bits (94), Expect = 7e-12 Identities = 138/196 (70%), Gaps = 2/196 (1%) Strand=Plus/Plus Query 42992 CTCCTTTTGAATATTGTAATCAGCCAGAGTCCGCTCGTCATCTAGCTGCTTACCAGCGAA 43051 |||||||||||||||||| || | || || ||| | || |||| |||||||||||||| Sbjct 17861 CTCCTTTTGAATATTGTAGTCGGATAGGGTTCGCCCATCCTCTAATTGCTTACCAGCGAA 17920 Query 43052 TATGAGTCGCTGCTGGTCGGCCGGCACGCTCTCCTTGTCCATGATTTTTTG-TTTGAGCG 43110 || || || ||||| || | ||| | | || || ||| ||| |||| | ||| | Sbjct 17921 GATAAGCCGTTGCTGATCTGGCGGTATACCTTCTTTATCC-TGAATTTTCGCTTTCACGT 17979 Query 43111 TCGCCACCGTGTCGCTCGATTCCACATCGACCGTGATGGTTTTGCCCGTTAGCGTCTTTA 43170 || | | | || || | || || || | || || ||||| || || || || |||| Sbjct 17980 TCTCGATGGAATCACTTGGCTCAACCTCAAGTGTTATAGTTTTTCCAGTAAGGGTTTTTA 18039 Query 43171 CAAAGATTTGCATTTT 43186 | || || |||||||| Sbjct 18040 CGAAAATCTGCATTTT 18055 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 571810759631960