Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Echinococcus_20granulosus_20[genbank_20GCA_5F000524195.1_202014-01- 28] 957 sequences; 110,837,706 total letters Query= NC_003225.3 Length=309286 Score E Sequences producing significant alignments: (Bits) Value seq948 93.3 8e-14 >seq948 Length=1705571 Score = 93.3 bits (102), Expect = 8e-14 Identities = 210/315 (67%), Gaps = 3/315 (1%) Strand=Plus/Plus Query 101918 GTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCTGG 101977 || || || ||||| |||||||| | |||||| |||| |||| || || || || ||| Sbjct 191780 GTGGCATTCGCTGCTGTTGAAGGCGTTTTCTTTTCTGGTTCATTTGCTTCTATCTTTTGG 191839 Query 101978 ATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTAGGGAC 102037 ||||||| | ||| | |||| || ||||||| | ||| ||||| || |||| Sbjct 191840 CTCAAGAAGCGCGGTCTCATGCCAGGCCTCACCTTCAGCAACGAGTTGATCAGCCGGGAT 191899 Query 102038 GAAGGTCTTCATCGCGACTTTGCATGCATGCTGTTGAAAAAGGGTTTTGTTGATACCCCA 102097 ||||| || || ||||||||||||| | | || ||| | | |||| | | || Sbjct 191900 GAAGGCCTCCACACCGACTTTGCATGCCTTATTTTTAAACA---TATTGTCAACAAACCT 191956 Query 102098 TCAAGAGAAAGGATTCTTGAAATTGTCACTGAAGCCGTCCGAATTGAACAAGAATTTCTC 102157 | |||||| || ||| ||| | | || || || | |||||| ||||||||| Sbjct 191957 ACGGCAGAAAGAGTTTATGACATTATGAGGGAGGCGGTTAGCATTGAATGCGAATTTCTC 192016 Query 102158 ACAGTTTCCCTGCCTGTTAAATTAGTGGGAATGAACTGCAAGTTGATGAGCCAGTACATT 102217 |||| | | ||||| || | | || ||||| || | ||| |||| ||||| Sbjct 192017 ACAGACGCATTACCTGTCAATCTTATTGGCATGAATTGTCGCCTAATGTGCCAATACATA 192076 Query 102218 GAATTTGTGGCAGAT 102232 ||||| || ||| Sbjct 192077 AGGTTTGTTGCCGAT 192091 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 989571866153935