Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Echinococcus_20granulosus_20[genbank_20GCA_5F000524195.1_202014-01- 28] 957 sequences; 110,837,706 total letters Query= NC_006883.2 Length=252401 Score E Sequences producing significant alignments: (Bits) Value seq782 84.2 4e-11 >seq782 Length=136922 Score = 84.2 bits (92), Expect = 4e-11 Identities = 107/145 (74%), Gaps = 2/145 (1%) Strand=Plus/Minus Query 194047 TTCTTTATCTTGGTAATCTTAATGCTAAGAGGGATTGGGGACACGCAAAGGATTATGTTG 194106 || || | || |||||||||||||| | | |||||||| |||| |||| |||||| Sbjct 86296 TTGTTGAGCTAGGTAATCTTAATGCAGAACGTGATTGGGGCTACGCGGAGGACTATGTTT 86237 Query 194107 AAGCGATGTGGTTAATGTTGCAACAGGATGAACCCGAT-GATTATGTGATTGCTACAGGT 194165 | ||||||||| | ||| | |||||||| ||| ||||| |||| || ||||| | || Sbjct 86236 ACGCGATGTGGCTCATGCTTCAACAGGA-GAAACCGATGGATTTCGTTATTGCCTCGGGC 86178 Query 194166 GAACAGTATTCTGTTAGAGACTTTG 194190 || || || |||| | || |||| Sbjct 86177 GAGAAGCATAGTGTTCGCGAATTTG 86153 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 807545539620920