Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Echinococcus_20granulosus_20[genbank_20GCA_5F000524195.1_202014-01- 28] 957 sequences; 110,837,706 total letters Query= NC_007151.1 Length=149622 Score E Sequences producing significant alignments: (Bits) Value seq907 100 3e-16 seq861 86.0 6e-12 >seq907 Length=590410 Score = 100 bits (110), Expect = 3e-16 Identities = 162/233 (70%), Gaps = 0/233 (0%) Strand=Plus/Minus Query 26763 AACAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATCACCATCGAATTAGAA 26822 ||||||||||| | || |||||||| | ||||||||| | || || | || | || Sbjct 18058 AACAAAATGCAGATTTTCGTAAAAACCCTTACTGGAAAAACTATAACACTTGAGGTTGAG 17999 Query 26823 TCAAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGGATACCTCCC 26882 ||| || |||||||| | || ||| || ||| || |||||||| ||||| || Sbjct 17998 CCAAGTGATTCCATCGAGAACGTGAAAGCGAAAATTCAGGATAAAGAAGGTATACCGCCA 17939 Query 26883 GATCAACAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAACGTCAGCGAC 26942 ||||| ||| | || || | || || || ||| | || |||| ||| | | |||| Sbjct 17938 GATCAGCAACGGCTTATCTTCGCTGGTAAGCAATTAGAGGATGGGCGAACCCTATCCGAC 17879 Query 26943 TATAACATTCAAAAAGAATCTACTATCCATCTGGTCCTGAGACTTAGAGGAGG 26995 || || |||||||| || || || | || || || || ||||| ||||||| Sbjct 17878 TACAATATTCAAAAGGAGTCGACACTTCACCTTGTTCTAAGACTACGAGGAGG 17826 >seq861 Length=317848 Score = 86.0 bits (94), Expect = 6e-12 Identities = 80/102 (78%), Gaps = 0/102 (0%) Strand=Plus/Minus Query 71672 ACGCATGATGAACTATGGAATGCTGCTCAGCGACAGCTACGCAATGAGGGTAAAATTCAC 71731 ||| | || || || ||||| || ||||| || ||||| ||| ||||| ||||| ||| Sbjct 36659 ACGGAAGACGATCTGTGGAACGCGGCTCAACGCCAGCTGCGCCGAGAGGGCAAAATGCAC 36600 Query 71732 GGATACCTACGCATGTACTGGGCCAAAAAGATTCTCGAGTGG 71773 |||| || || |||||||||||||||||||| || || ||| Sbjct 36599 GGATTTCTGCGGATGTACTGGGCCAAAAAGATCCTTGAATGG 36558 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 478656674001040