Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Echinococcus_20granulosus_20[genbank_20GCA_5F000524195.1_202014-01- 28] 957 sequences; 110,837,706 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq948 105 2e-17 >seq948 Length=1705571 Score = 105 bits (116), Expect = 2e-17 Identities = 150/209 (72%), Gaps = 3/209 (1%) Strand=Plus/Plus Query 22438 AATAAGGCAGATTGGGCGCTGAAATGGATGAACAAT--GAACGTTC-ATTCGCGGAACGT 22494 || || || |||||||| || | ||||| ||| ||| | || || ||| || || Sbjct 191717 AAGAAAGCCGATTGGGCTCTTAGGTGGATTGCAAATAGGAAGGCTCCATACGCCGAGCGG 191776 Query 22495 CTTATTGCATTTGCTGTGGTTGAAGGCATTTTCTTTTCTGGAGCATTTTGTGCAATCTTT 22554 || | ||||| |||| ||||||||| ||||||||||||| ||||| | | |||||| Sbjct 191777 CTAGTGGCATTCGCTGCTGTTGAAGGCGTTTTCTTTTCTGGTTCATTTGCTTCTATCTTT 191836 Query 22555 TGGCTaaaaaaaCGTGCAATTATGCCGGGTCTAACGTTTTCAAATGAGTTAATTAGCCGA 22614 ||||| || || || | | ||||| || || || || || ||||| || ||||| Sbjct 191837 TGGCTCAAGAAGCGCGGTCTCATGCCAGGCCTCACCTTCAGCAACGAGTTGATCAGCCGG 191896 Query 22615 GATGAGGGTCTTCATACCGATTTTGCGTG 22643 ||||| || || || ||||| ||||| || Sbjct 191897 GATGAAGGCCTCCACACCGACTTTGCATG 191925 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303337618848374