Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Echinococcus_20granulosus_20[genbank_20GCA_5F000524195.1_202014-01- 28] 957 sequences; 110,837,706 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq929 95.1 1e-14 >seq929 Length=940754 Score = 95.1 bits (104), Expect = 1e-14 Identities = 118/159 (74%), Gaps = 2/159 (1%) Strand=Plus/Plus Query 172799 TTCCCACGGAGAGGGAACACACCGTAGTGATCACGACCAACCACAGAAAGACCAGCAACT 172858 || || || |||||||| ||||| ||| | ||||| |||||||| |||||||| || Sbjct 244958 TTACCTCGCAGAGGGAAAACACCATAGCGGTCACGTCCAACCACTCCGAGACCAGCCACG 245017 Query 172859 GCGAGGGTCTTCGCGGAATCACCCTCCGTCACGATGAGCGTACACTT-TCCAGATTGTGC 172917 || || | || || ||||| || || || | |||||| || || | | | ||| | | Sbjct 245018 GCCAGAGATTTGGCTGAATCCCCTTCAGTGAGGATGAGGGTGCAGTGCTGCGAATTCTTC 245077 Query 172918 CGTCCCCGCCTTGTTCGCATCGTCCAACTTGGGAATACC 172956 |||||||| | ||| |||||||||||||| ||||| || Sbjct 245078 -GTCCCCGCGTCGTTAGCATCGTCCAACTTTGGAATCCC 245115 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597346454157560