Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Echinococcus_20granulosus_20[genbank_20GCA_5F000524195.1_202014-01- 28] 957 sequences; 110,837,706 total letters Query= NC_011183.1 Length=154641 Score E Sequences producing significant alignments: (Bits) Value seq953 86.0 6e-12 >seq953 Length=2188470 Score = 86.0 bits (94), Expect = 6e-12 Identities = 110/152 (72%), Gaps = 0/152 (0%) Strand=Plus/Plus Query 94486 GAGACGGGTACGCCCTACATCTTGTTCAAGGACTCTGTCAACGCCAAGTCCAACCAGCAG 94545 || ||||| | || | || |||| |||||| ||| ||| ||| ||||| ||||| Sbjct 252111 GAAACGGGCAATCCGTTTATGTTGTACAAGGATTCTTGCAATCGCAAATCCAATCAGCAA 252170 Query 94546 CACCTCGGGGTGATCAAGAGCTCGAATCTGTGCACCGAGATTGTCGAGTATACTTCTCCG 94605 ||||| ||| || ||| |||| ||||| ||||| || ||||||||||| | || || Sbjct 252171 CACCTAGGGACCATAAAGTGCTCAAATCTTTGCACTGAAATTGTCGAGTACAGCTCGCCT 252230 Query 94606 GACGAGATTGCTGTGTGTAACCTGGGCTCCAT 94637 |||| |||||| ||||| ||| ||||| Sbjct 252231 ACAGAGACTGCTGTCTGTAATTTGGCTTCCAT 252262 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 494717281873720