Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Echinococcus_20granulosus_20[genbank_20GCA_5F000524195.1_202014-01- 28] 957 sequences; 110,837,706 total letters Query= NC_020851.1 Length=208007 Score E Sequences producing significant alignments: (Bits) Value seq782 102 1e-16 >seq782 Length=136922 Score = 102 bits (112), Expect = 1e-16 Identities = 116/156 (74%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 47938 GCTCTTGTAATCTTACGAGTTACAAAAGTTTCACCACGTCTTGGAGATTCATGATTAAAA 47997 ||||| || || || | |||||||||||||| || | | ||| ||| || |||||| Sbjct 86371 GCTCTGGTGATTTTCCTGGTTACAAAAGTTTCGCCCCTGCGTGGGCTTTCGTGGTTAAAA 86430 Query 47998 AGAATACCACTACAGGCATACATTCCGTATGATTCACGATAGTTCTTTACTATCCAGTAC 48057 ||||||||| | || ||| |||| |||| |||||||||||||| || |||||||| Sbjct 86431 AGAATACCATTGCAAGCAAACATATCGTAGGATTCACGATAGTTTACAACAATCCAGTAG 86490 Query 48058 CCATAGAGTTTTGCAACACCATAAGGAGAACGTGGA 48093 |||| || ||||| |||| || | ||||| || Sbjct 86491 GCATACAGCTTTGCCGCACCTAAAATAAAACGTAGA 86526 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 665486439023240