Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Echinococcus_20granulosus_20[genbank_20GCA_5F000524195.1_202014-01- 28] 957 sequences; 110,837,706 total letters Query= NC_021247.1 Length=228750 Score E Sequences producing significant alignments: (Bits) Value seq907 104 3e-17 >seq907 Length=590410 Score = 104 bits (114), Expect = 3e-17 Identities = 169/241 (70%), Gaps = 2/241 (1%) Strand=Plus/Minus Query 155817 AATAAAATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGAA 155876 || |||||||| || || | ||||| | |||||||||||||| ||| | || || || Sbjct 18058 AACAAAATGCAGATTTTCGTAAAAACCCTTACTGGAAAAACTATAACACTTGAGGTTGAG 17999 Query 155877 GATTCTGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCCA 155936 |||| || ||||||||| ||||| || ||||||||||| ||||| ||| Sbjct 17998 CCAAGTGATTCCATCGAGAACGTGAAAGCGAAAATTCAGGATAAAGAAGGTATACCGCCA 17939 Query 155937 GAACAACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGAT 155996 || || ||| | | || | || |||||||| | || ||| |||| |||| || Sbjct 17938 GATCAGCAACGGCTTATCTTCGCTGGTAAGCAATTAGAGGATGGGCGAACCCTATCCGAC 17879 Query 155997 TATAATATATCCAAA-GAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGGTGTAAA 156055 || ||||| || ||| ||| |||| ||||| | || ||||| || |||| ||| | || Sbjct 17878 TACAATAT-TCAAAAGGAGTCGACACTTCACCTTGTTCTAAGACTACGAGGAGGTATGAA 17820 Query 156056 A 156056 | Sbjct 17819 A 17819 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 731863244981200