Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Echinococcus_20granulosus_20[genbank_20GCA_5F000524195.1_202014-01- 28] 957 sequences; 110,837,706 total letters Query= NC_021248.1 Length=307691 Score E Sequences producing significant alignments: (Bits) Value seq907 102 2e-16 >seq907 Length=590410 Score = 102 bits (112), Expect = 2e-16 Identities = 141/196 (72%), Gaps = 1/196 (1%) Strand=Plus/Plus Query 192347 CTTTAGAGATATTATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGA 192406 |||| || ||||| || || |||| ||||| |||| || ||||| |||||||| |||| Sbjct 17864 CTTTTGA-ATATTGTAGTCGGATAGGGTTCGCCCATCCTCTAATTGCTTACCAGCGAAGA 17922 Query 192407 TTAATCTCTGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAG 192466 | | | || ||||| || ||||| ||||||||||| || ||||| ||| || || Sbjct 17923 TAAGCCGTTGCTGATCTGGCGGTATACCTTCTTTATCCTGAATTTTCGCTTTCACGTTCT 17982 Query 192467 TTATAGAATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAA 192526 || ||||| | || || || || || || ||||| ||||| | ||||| | | Sbjct 17983 CGATGGAATCACTTGGCTCAACCTCAAGTGTTATAGTTTTTCCAGTAAGGGTTTTTACGA 18042 Query 192527 ATATCTGCATTTTATT 192542 | ||||||||||| || Sbjct 18043 AAATCTGCATTTTGTT 18058 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 984467928736950