Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Echinococcus_20granulosus_20[genbank_20GCA_5F000524195.1_202014-01- 28] 957 sequences; 110,837,706 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq890 86.0 5e-12 >seq890 Length=444197 Score = 86.0 bits (94), Expect = 5e-12 Identities = 116/162 (72%), Gaps = 0/162 (0%) Strand=Plus/Plus Query 34320 AGTCTCCGGGTTGTCACATTCCGGACACAACACAAACTTGCGGATGAAACCATCAAGCAG 34379 ||| |||||||| |||| | | |||| ||||||||| |||||| || ||||| Sbjct 303744 AGTTTCCGGGTTTCCACAATTTGAGCACAGTACAAACTTGTTGATGAATCCGAAAAGCAA 303803 Query 34380 GTCCTGTAACTTAACGGAGTCGTGGGAGCCGTTGACGATGAATCGTTCGTTTTTGTAATC 34439 || || | | | | | ||||||| |||||||| ||| | | || || || | ||| Sbjct 303804 CTCTTGCAGCCGAGCTGTATCGTGGGCACCGTTGACTATGTACCTGTCATTCTTATCATC 303863 Query 34440 GACCTGCGTTTGCGCGCCCAGCTCGCACCCGAAGTACTTTGT 34481 ||| || | || |||||||||||||| || |||||||| || Sbjct 303864 GACATGAATCTGGGCGCCCAGCTCGCAGCCAAAGTACTTGGT 303905 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412836784847801