Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Echinococcus_20granulosus_20[genbank_20GCA_5F000524195.1_202014-01- 28] 957 sequences; 110,837,706 total letters Query= NC_024446.1 Length=306862 Score E Sequences producing significant alignments: (Bits) Value seq434 132 9e-26 seq956 129 1e-24 >seq434 Length=2816 Score = 132 bits (146), Expect = 9e-26 Identities = 162/221 (73%), Gaps = 0/221 (0%) Strand=Plus/Plus Query 82595 ACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACC 82654 ||| || || | ||||||||| || || ||||| || || || || || || | | || Sbjct 95 ACGAAGCACAAGGTGCAGAGTCGACTCCTTCTGAATGTTGTAGTCGGAAAGGGTACGGCC 154 Query 82655 GTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTT 82714 |||||| | || ||||| || || || || | || ||||| || || || ||||| || Sbjct 155 GTCTTCCAACTGCTTTCCCGCGAATATCAGACGCTGCTGATCCGGTGGAATGCCTTCTTT 214 Query 82715 ATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTAT 82774 ||||||||||| || || || || || |||| ||| |||| || || |||||||| || Sbjct 215 GTCTTGAATCTTAGCCTTCACGTTCTCTATCGAGTCACTAGGCTCAACCTCCAAAGTAAT 274 Query 82775 CGTCTTGCCTGTCAACGTCTTTACAAATATCTGCATTATTA 82815 ||||| || || | ||||| || || |||||||| |||| Sbjct 275 AGTCTTTCCAGTGAGTGTCTTCACGAAGATCTGCATGATTA 315 >seq956 Length=3269709 Score = 129 bits (142), Expect = 1e-24 Identities = 158/216 (73%), Gaps = 0/216 (0%) Strand=Plus/Minus Query 82595 ACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACC 82654 ||| || || | ||| || || || || ||||| ||||| || ||||||| | || Sbjct 2620876 ACGAAGCACAAGGTGAAGGGTTGACTCCTTCTGAATATTGTAGTCAGATAAGGACCGCCC 2620817 Query 82655 GTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTT 82714 || || | || || |||||||| || || | || |||||||| || || || ||||| Sbjct 2620816 ATCCTCCAACTGCTTGCCAGCAAAAATAAGACGCTGCTGATCTGGTGGAATACCCTCCTT 2620757 Query 82715 ATCTTGAATCTTTGCTTTTACATTTTCAATCGTATCATTAGGTTCTACTTCCAAAGTTAT 82774 ||||||||||| || |||||||| ||||| | |||| ||| || || || | ||||| Sbjct 2620756 GTCTTGAATCTTAGCCTTTACATTCTCAATAGAATCAGAAGGCTCGACCTCAAGGGTTAT 2620697 Query 82775 CGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 || ||||| || | || |||||||| |||||||| Sbjct 2620696 GGTTTTGCCAGTAAGAGTTTTTACAAAAATCTGCAT 2620661 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 981815161264423