Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Echinococcus_20granulosus_20[genbank_20GCA_5F000524195.1_202014-01- 28] 957 sequences; 110,837,706 total letters Query= NC_024625.1 Length=151109 Score E Sequences producing significant alignments: (Bits) Value seq956 102 8e-17 >seq956 Length=3269709 Score = 102 bits (112), Expect = 8e-17 Identities = 142/199 (71%), Gaps = 0/199 (0%) Strand=Plus/Minus Query 133463 GGTGGACTCTTTCTGTATATTGTAATCGCCCATCGTGGACGAGTCCTCGAGCTGCTTGCC 133522 ||| ||||| ||||| |||||||| || | | | ||||| | ||||||||| Sbjct 2620858 GGTTGACTCCTTCTGAATATTGTAGTCAGATAAGGACCGCCCATCCTCCAACTGCTTGCC 2620799 Query 133523 CGCGTAAATGAGCCGCTGCTGGTCGGGAGGGATGCCTTCCTTGTCGGTGATCTTTTGCTT 133582 || |||| || |||||||| || || || || || |||||||| ||||| ||| Sbjct 2620798 AGCAAAAATAAGACGCTGCTGATCTGGTGGAATACCCTCCTTGTCTTGAATCTTAGCCTT 2620739 Query 133583 GAGCTGCTCAACCGTGTCGGTGGGCTCCACGTCGACGGTGACGGTTTTGCCGGTCAGAGT 133642 | | ||||| | || | ||||| || || | ||| | ||||||||| || ||||| Sbjct 2620738 TACATTCTCAATAGAATCAGAAGGCTCGACCTCAAGGGTTATGGTTTTGCCAGTAAGAGT 2620679 Query 133643 TTTTACGAAAATCTGCATG 133661 |||||| |||||||||||| Sbjct 2620678 TTTTACAAAAATCTGCATG 2620660 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 483415017078680