Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Echinococcus_20granulosus_20[genbank_20GCA_5F000524195.1_202014-01- 28] 957 sequences; 110,837,706 total letters Query= NC_024697.1 Length=370920 Score E Sequences producing significant alignments: (Bits) Value seq957 93.3 1e-13 >seq957 Length=3893204 Score = 93.3 bits (102), Expect = 1e-13 Identities = 175/254 (69%), Gaps = 10/254 (4%) Strand=Plus/Minus Query 304885 TTTACAATATCATATTGCAACATTAATGGATAATGAAATTGCTGGAATTATGC---AGGC 304941 ||||||||||||| | || || | || ||||| || ||| | || | ||| |||| Sbjct 336025 TTTACAATATCATGTGGCTACCCTGATTGATAACGATATTCCCGG---TCTGCCAAAGGC 335969 Query 304942 ATCTCAAAGATCTGGCAGACCTTTAAAGGGTATTAGGCAACGCATTAAAGGTAAAGAGGG 305001 ||| | ||||| |||||| ||||| || | ||||| | || || || | || Sbjct 335968 TATTCAGAAGTCTGGAAGACCTCTAAAGTCAATCAAACAACGTCTAAAGGGAAAGGCCGG 335909 Query 305002 TCGTATTCGAGGTAATCTAATGGGAAAACGTGTTGATTTTAGTGCAAGAAGTGTAATCAC 305061 || || ||||||||| | ||||| |||||||||||||| ||| ||| ||| || || Sbjct 335908 ACGCATACGAGGTAATTTGATGGGGAAACGTGTTGATTTCTCTGCTCGAACTGTTATAAC 335849 Query 305062 ACCTGATTCTCAAATTAGTCTTCATGAATTAGGAGTTCCAATTGAA--ATTGCTTTAAAA 305119 ||||| || | | ||||| || || | || ||||| ||| ||||| || Sbjct 335848 TGCTGATCCTAATTTGTGTCTTGATCAAGTTGGTGTTCC--CCGAACCATTGCCCAGAAC 335791 Query 305120 CTAACATTTCCAGA 305133 ||||||| |||||| Sbjct 335790 CTAACATATCCAGA 335777 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1186798247820677