Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Echinococcus_20granulosus_20[genbank_20GCA_5F000524195.1_202014-01- 28] 957 sequences; 110,837,706 total letters Query= NC_026268.1 Length=139132 Score E Sequences producing significant alignments: (Bits) Value seq907 109 5e-19 >seq907 Length=590410 Score = 109 bits (120), Expect = 5e-19 Identities = 166/234 (71%), Gaps = 2/234 (1%) Strand=Plus/Minus Query 25169 AACAACATGCAAGTGTTTGTAAAAACATTAACCGGAAAATCGATCACGATCGAAGTCGAA 25228 ||||| ||||| | || |||||||| | || |||||| | || || | || || || Sbjct 18058 AACAAAATGCAGATTTTCGTAAAAACCCTTACTGGAAAAACTATAACACTTGAGGTTGA- 18000 Query 25229 GCCAAC-GATACTATCGAGCAAGTAAAACAAAAAATTACCGATAAAGAGGGTATACCGCC 25287 ||||| ||| | |||||| | || ||| |||||| |||||||| ||||||||||| Sbjct 17999 GCCAAGTGATTCCATCGAGAACGTGAAAGCGAAAATTCAGGATAAAGAAGGTATACCGCC 17940 Query 25288 CGATCAGCAAAGACTCATTTACGGCGGCAAACAACTCGAAGATGATAGAAATGTCAGCGA 25347 ||||||||| | || || | || || || ||| | || |||| ||| | ||| Sbjct 17939 AGATCAGCAACGGCTTATCTTCGCTGGTAAGCAATTAGAGGATGGGCGAACCCTATCCGA 17880 Query 25348 TTACAATATTCAAAAAGAATCCACCATTCATTTAGTGTTAAGATTGAGAGGAGG 25401 |||||||||||||| || || || |||| | || ||||| | ||||||| Sbjct 17879 CTACAATATTCAAAAGGAGTCGACACTTCACCTTGTTCTAAGACTACGAGGAGG 17826 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 445089075558240