Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Echinococcus_20granulosus_20[genbank_20GCA_5F000524195.1_202014-01- 28] 957 sequences; 110,837,706 total letters Query= NC_027923.1 Length=132831 Score E Sequences producing significant alignments: (Bits) Value seq907 86.0 5e-12 >seq907 Length=590410 Score = 86.0 bits (94), Expect = 5e-12 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 27051 GTAGAGTCTTTTTGAATATTGTAGTCGCTCATGTTGCGCTCGTCTTCGAGCTGTTTACCG 27110 || || || |||||||||||||||||| | | | ||| | || || | || ||||| Sbjct 17856 GTCGACTCCTTTTGAATATTGTAGTCGGATAGGGTTCGCCCATCCTCTAATTGCTTACCA 17915 Query 27111 GCGTAAATGAGACGCTGTTGATCCGGCGGCACACCCTCTTTATCGGCGATCTTGTTTTTC 27170 ||| | || || || || ||||| ||||| | ||| |||||||| || || |||| Sbjct 17916 GCGAAGATAAGCCGTTGCTGATCTGGCGGTATACCTTCTTTATCCTGAATTTTCGCTTTC 17975 Query 27171 AGGGTTTCTACAGTGTCTGTGGCTTCAACTTCTAGAGTTATAGATTTGCCCGTCAGAGTT 27230 | | | || | | || | | ||||| || || ||||||| ||| || || || ||| Sbjct 17976 ACGTTCTCGATGGAATCACTTGGCTCAACCTCAAGTGTTATAGTTTTTCCAGTAAGGGTT 18035 Query 27231 TTCACAAAGATTTGCAT 27247 || || || || ||||| Sbjct 18036 TTTACGAAAATCTGCAT 18052 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 424929443804184