Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Echinococcus_20multilocularis_20[genbank_20GCA_5F000469725.3_202015-
12-10] 1,217 sequences; 114,963,228 total letters
Query= NC_001132.2
Length=161773
Score E
Sequences producing significant alignments: (Bits) Value
seq1209 136 4e-27
>seq1209
Length=14622995
Score = 136 bits (150), Expect = 4e-27
Identities = 501/781 (64%), Gaps = 8/781 (1%)
Strand=Plus/Minus
Query 16774 GTACCCCAGTTCGGCGATTAATCTATCCGCTACAAATTCTATATATTGGCACATTAATTC 16833
||| ||||| || | | || | ||| || ||||| ||| |||||||||||||
Sbjct 7446793 GTATCCCAGCTCTGTAAGTAGCCGATCGGCAACAAACCTTATGTATTGGCACATTAGGCG 7446734
Query 16834 GCAGTTCATTCCTATAAGACGTACCGGAAGAGCTTCCGTCAAAAATCGTTGC--TCTATA 16891
|| ||||| || |||||| || || | || || || | |||| | || || ||
Sbjct 7446733 ACAATTCATGCCAATAAGATTGACAGGTAATGCGTCTGTGAGAAAT--TCGCATTCAATG 7446676
Query 16892 ACAACCGCTTCCTTAATAATACTAGCAACTCGTTCCTCGGACGGTGTATGTTTAAGATGT 16951
|||||| ||| | ||||| | ||||| | | | | ||| | | || ||||
Sbjct 7446675 CTAACCGCCTCCCTCATAATGTCATAAACTCTTGCTGCCGTAGGTTTGTTGACAATATGT 7446616
Query 16952 TTAAACATCAGACATGCGAAATCGCAATGTAATCCCTCGTCTCTGCTGATAAGTTCGTTA 17011
||||| || || ||||| |||||| || | || || || | |||||| | |||||
Sbjct 7446615 TTAAAAATAAGGCATGCAAAATCGGTGTGGAGGCCTTCATCCCGGCTGATCAACTCGTTG 7446556
Query 17012 GAAAATGTCAACCCGGGCATCTTTCCTCGTTTCTTTAACCAAAATATCGCGGCGAACGAC 17071
|| || | || ||||| || || ||||| | |||||| || | || || ||
Sbjct 7446555 CTGAAGGTGAGGCCTGGCATGAGACCACGCTTCTTGAGCCAAAAGATAGAAGCAAATGAA 7446496
Query 17072 CCAGAAAAGAATATACCCTCGACGGATGCAAACGCGATTAATCGTTCGGCGTACGTCGCG 17131
||||||||||| | || || || | || || || | || || || ||||| | ||
Sbjct 7446495 CCAGAAAAGAAAACGCCTTCAACAGCAGCGAATGCCACTAGCCGCTCAGCGTATGGGGCT 7446436
Query 17132 TCTTTGTTACGAATCCATTTCTGCACCCACTCGGCTTTTTGCTTTATGCAATCCATCGTT 17191
| | || |||||| | | |||| |||||||| | | || || |||
Sbjct 7446435 TTCCTATTTGCAATCCACCTAAGAGCCCAATCGGCTTTCTTAGCAACACATGGCAGCGTC 7446376
Query 17192 TCTATGGCCTTAAATAATTTCTCTTTTTCCTGTAGGTCGATTATATACGTATCGATGAGT 17251
| | ||| ||||| || || |||| | | || | || || ||||| || ||
Sbjct 7446375 TGAACGGCGTTAAACAAAAAGTCGCGTTCCACTGGATCCTTAATGTAGGTATCAATCAGA 7446316
Query 17252 AGGCTGTACATTTCGGAGTGTATGTTCTCCATGGCTATCTGAAATCCGTAAAAGCATCGG 17311
|| |||||||||||| || ||||| || | ||| | || | |||||||| || ||
Sbjct 7446315 AGAGAGTACATTTCGGAATGAATGTTTTCGACGGCGACTTGCATCCCGTAAAAACAACGA 7446256
Query 17312 GCTTCCGCTATTTGAACTTCCACGTAGAATCGTTC--CGCTAGATTTTCGTTCACGATGC 17369
|| || | ||||| ||||| || || |||| | ||| ||||| || |||||||
Sbjct 7446255 GCCTCGGGAATTTGGACTTC--GTTACAAAAGTTCAAAGTTAGGTTTTCATTAACGATGC 7446198
Query 17370 CGTCGCTCGCGGCGAAAAACGCCAATATATGCTTAATGAAATATTTTTCGTCCGGTGTAA 17429
| || || || || ||||| ||||| | || ||||||| |||| | |||
Sbjct 7446197 CATCACTGGCTGCAAAAAAAGCCAAAACATAAGATATGAAATGACGTTCGCCATCATTAA 7446138
Query 17430 GAACGCGCCAGTCCTTTAAATCTTTGGATATATCCACTTCTTCGGGGGTCCAAAAACTAG 17489
| | ||| || | | || || | | ||| ||||| || |||||||| |
Sbjct 7446137 GGCCTTCCCAATCAGTGAGGTCCTTCGCCAAATCGACTTCCTCAACTGTCCAAAAGGAGG 7446078
Query 17490 CCACTGCCTTTTTATACATATTCCAAATATCATTGTATTGTATGGGGAATACAACATATC 17549
| || || || || || | | ||| || |||| ||||| ||||| | |||||| |||
Sbjct 7446077 CAACAGCTTTCTTGTAAAACTCCCAGATGTCATGATATTGGATGGGCATCACAACAAATC 7446018
Query 17550 T 17550
|
Sbjct 7446017 T 7446017
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 517537726837560
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |