Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Echinococcus_20multilocularis_20[genbank_20GCA_5F000469725.3_202015- 12-10] 1,217 sequences; 114,963,228 total letters Query= NC_001623.1 Length=133894 Score E Sequences producing significant alignments: (Bits) Value seq1207 86.0 5e-12 >seq1207 Length=20116479 Score = 86.0 bits (94), Expect = 5e-12 Identities = 107/145 (74%), Gaps = 4/145 (3%) Strand=Plus/Minus Query 29046 AAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAACAAAGACTTATCTTTGCGGGCAAA 29105 |||||| |||||||| ||| | || |||||| ||| | |||||||| || || || Sbjct 17430881 AAAATTCAGGATAAAGAGGGTATACCGCCAGATCAGCAACGCCTTATCTTCGCTGGTAAG 17430822 Query 29106 CAACTGGAAGATT--CCAAAACTATGGCCGATTACAATATTCAGAAGGAATCTACTCTTC 29163 ||| | || ||| | || |||| |||| ||||||||||| ||||| || || |||| Sbjct 17430821 CAATTAGAGGATGGGCGAACCCTAT--CCGACTACAATATTCAAAAGGAGTCGACACTTC 17430764 Query 29164 ACATGGTGTTACGATTACGAGGAGG 29188 || | || || || |||||||||| Sbjct 17430763 ACCTTGTTCTAAGACTACGAGGAGG 17430739 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 428329646840135