Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Echinococcus_20multilocularis_20[genbank_20GCA_5F000469725.3_202015- 12-10] 1,217 sequences; 114,963,228 total letters Query= NC_001962.1 Length=128413 Score E Sequences producing significant alignments: (Bits) Value seq1207 95.1 1e-14 >seq1207 Length=20116479 Score = 95.1 bits (104), Expect = 1e-14 Identities = 109/145 (75%), Gaps = 4/145 (3%) Strand=Plus/Minus Query 25119 AAAATTGCCGATAAAGAAGGTGTGCCCGTAGATCAACAAAGACTTATCTTTGCGGGCAAA 25178 |||||| |||||||| ||| | || |||||| ||| | |||||||| || || || Sbjct 17430881 AAAATTCAGGATAAAGAGGGTATACCGCCAGATCAGCAACGCCTTATCTTCGCTGGTAAG 17430822 Query 25179 CAATTGGAAGATT--CCAAAACTATGGCCGATTACAATATTCAAAAGGAATCTACTCTTC 25236 ||||| || ||| | || |||| |||| ||||||||||||||||| || || |||| Sbjct 17430821 CAATTAGAGGATGGGCGAACCCTAT--CCGACTACAATATTCAAAAGGAGTCGACACTTC 17430764 Query 25237 ACATGGTGTTACGATTACGAGGAGG 25261 || | || || || |||||||||| Sbjct 17430763 ACCTTGTTCTAAGACTACGAGGAGG 17430739 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 410790706984838