Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Echinococcus_20multilocularis_20[genbank_20GCA_5F000469725.3_202015-
12-10] 1,217 sequences; 114,963,228 total letters
Query= NC_003225.3
Length=309286
Score E
Sequences producing significant alignments: (Bits) Value
seq1209 84.2 4e-11
>seq1209
Length=14622995
Score = 84.2 bits (92), Expect = 4e-11
Identities = 208/315 (66%), Gaps = 3/315 (1%)
Strand=Plus/Plus
Query 101918 GTTGCCTTTGCTGCAGTTGAAGGAATCTTCTTTAGTGGTGCATTCGCATCCATTTTCTGG 101977
|| || || ||||| |||||||| | |||||| |||| |||| || || || || |||
Sbjct 7446458 GTGGCATTCGCTGCTGTTGAAGGCGTTTTCTTTTCTGGTTCATTTGCTTCTATCTTTTGG 7446517
Query 101978 ATCAAGAACAGGGGTATTTTGCCTGGTCTCACCTCCTCCAATGAGTTCATTTCTAGGGAC 102037
||||||| | ||| | |||| || ||||||| | ||| ||||| || ||||
Sbjct 7446518 CTCAAGAAGCGTGGTCTCATGCCAGGCCTCACCTTCAGCAACGAGTTGATCAGCCGGGAT 7446577
Query 102038 GAAGGTCTTCATCGCGACTTTGCATGCATGCTGTTGAAAAAGGGTTTTGTTGATACCCCA 102097
||||| || || ||| ||||||||| | | || ||| | | |||| | | ||
Sbjct 7446578 GAAGGCCTCCACACCGATTTTGCATGCCTTATTTTTAAACA---TATTGTCAACAAACCT 7446634
Query 102098 TCAAGAGAAAGGATTCTTGAAATTGTCACTGAAGCCGTCCGAATTGAACAAGAATTTCTC 102157
| || ||| || ||| ||| | | || || || | |||||| |||||||||
Sbjct 7446635 ACGGCAGCAAGAGTTTATGACATTATGAGGGAGGCGGTTAGCATTGAATGCGAATTTCTC 7446694
Query 102158 ACAGTTTCCCTGCCTGTTAAATTAGTGGGAATGAACTGCAAGTTGATGAGCCAGTACATT 102217
|||| | | ||||| || | | || ||||| || | ||| |||| |||||
Sbjct 7446695 ACAGACGCATTACCTGTCAATCTTATTGGCATGAATTGTCGCCTAATGTGCCAATACATA 7446754
Query 102218 GAATTTGTGGCAGAT 102232
||||| || |||
Sbjct 7446755 AGGTTTGTTGCCGAT 7446769
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 989568569602235
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |