Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Echinococcus_20multilocularis_20[genbank_20GCA_5F000469725.3_202015-
12-10] 1,217 sequences; 114,963,228 total letters
Query= NC_006966.1
Length=166259
Score E
Sequences producing significant alignments: (Bits) Value
seq1209 129 6e-25
>seq1209
Length=14622995
Score = 129 bits (142), Expect = 6e-25
Identities = 385/593 (65%), Gaps = 14/593 (2%)
Strand=Plus/Minus
Query 21453 ACAATAATTGTTTAAACATCAAACATGCAAAATCACAATGCAAACCTTCATCCCTACTTA 21512
|||||| |||||||| || | ||||||||||| || | |||||||||| || |
Sbjct 7446624 ACAATA--TGTTTAAAAATAAGGCATGCAAAATCGGTGTGGAGGCCTTCATCCCGGCTGA 7446567
Query 21513 TTAATTCATTAGAAAATGTTAAACCGGGCATTAATCCTCTCTTTTTTAACCAAAATATTG 21572
| || || || || || | || ||||| | || | ||| || | |||||| || |
Sbjct 7446566 TCAACTCGTTGCTGAAGGTGAGGCCTGGCATGAGACCACGCTTCTTGAGCCAAAAGATAG 7446507
Query 21573 ACGCAAATGCTCCTGAAAAGAAAATGCCCTCAACGGCAGCAAATGCAACTAATCGTTCAC 21632
| ||||||| || |||||||||| ||| ||||| ||||| ||||| |||| || |||
Sbjct 7446506 AAGCAAATGAACCAGAAAAGAAAACGCCTTCAACAGCAGCGAATGCCACTAGCCGCTCAG 7446447
Query 21633 CGTATGTAGATT--CTTTATCCAATATCCATTTTTCTGCCCATTTTGCCTTTTCTTT--A 21688
|||||| | || || | | |||| ||| | ||||| | || |||||| |
Sbjct 7446446 CGTATGGGGCTTTCCTATTTGCAAT--CCACCTAAGAGCCCAATCGGC--TTTCTTAGCA 7446391
Query 21689 ATACAATCAATTGTATCAATAGCTTTTAAAAGATGAtttttttCATCTACATCGGTTATG 21748
| ||| | || | || || || || | | | ||| || ||| | |||
Sbjct 7446390 ACACATGGCAGCGTCTGAACGGCGTTAAACAAAAAGTCGCGTTCCACTGGATCCTTAATG 7446331
Query 21749 NNNNNNNNNNNNNNNNNACTATACATTTCAGAATGTATATTTTCTATCGCTATCTGAAAT 21808
| |||||||| ||||| || ||||| | || | || |
Sbjct 7446330 TAGGTATCAATCAGAAGAGAGTACATTTCGGAATGAATGTTTTCGACGGCGACTTGCATC 7446271
Query 21809 CCGTAAAAACATCTTGCCTCTGAACATTGAACCTCGGAATAAAATCGTTGA--GCCAAGT 21866
||||||||||| | ||||| | | ||| || ||| | |||| ||| | | | ||
Sbjct 7446270 CCGTAAAAACAACGAGCCTCGGGAATTTGGACTTCGTTACAAAA--GTTCAAAGTTAGGT 7446213
Query 21867 TTTCATTTACTATTCCATCACTGGCGGCAAAAAATGCCAATATATTTTTTATAAAATATC 21926
||||||| || || ||||||||||| |||||||| ||||| | || ||| |||| |
Sbjct 7446212 TTTCATTAACGATGCCATCACTGGCTGCAAAAAAAGCCAAAACATAAGATATGAAATGAC 7446153
Query 21927 GTTCGTTATCTGTTAATTTTTTCCAATCTAATAAATCTTTTGATAAATCTACTTCTTCAG 21986
||||| ||| | | || |||||| | || || | ||||| ||||| |||
Sbjct 7446152 GTTCGCCATCATTAAGGCCTTCCCAATCAGTGAGGTCCTTCGCCAAATCGACTTCCTCAA 7446093
Query 21987 TTGTCCAAAAGCTAGCAATAGCCTTTTTATACATAATCCAGATATCATTATAT 22039
|||||||||| |||| ||| || || || | |||||| |||| ||||
Sbjct 7446092 CTGTCCAAAAGGAGGCAACAGCTTTCTTGTAAAACTCCCAGATGTCATGATAT 7446040
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 531892708459080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |