Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Echinococcus_20multilocularis_20[genbank_20GCA_5F000469725.3_202015- 12-10] 1,217 sequences; 114,963,228 total letters Query= NC_007346.1 Length=407339 Score E Sequences producing significant alignments: (Bits) Value seq1209 109 1e-18 >seq1209 Length=14622995 Score = 109 bits (120), Expect = 1e-18 Identities = 122/163 (75%), Gaps = 0/163 (0%) Strand=Plus/Plus Query 22481 CATTCGCGGAACGTCTTATTGCATTTGCTGTGGTTGAAGGCATTTTCTTTTCTGGAGCAT 22540 ||| ||| || || || | ||||| |||| ||||||||| ||||||||||||| ||| Sbjct 7446441 CATACGCTGAGCGGCTAGTGGCATTCGCTGCTGTTGAAGGCGTTTTCTTTTCTGGTTCAT 7446500 Query 22541 TTTGTGCAATCTTTTGGCTaaaaaaaCGTGCAATTATGCCGGGTCTAACGTTTTCAAATG 22600 || | | ||||||||||| || || |||| | ||||| || || || || || | Sbjct 7446501 TTGCTTCTATCTTTTGGCTCAAGAAGCGTGGTCTCATGCCAGGCCTCACCTTCAGCAACG 7446560 Query 22601 AGTTAATTAGCCGAGATGAGGGTCTTCATACCGATTTTGCGTG 22643 |||| || ||||| ||||| || || || ||||||||||| || Sbjct 7446561 AGTTGATCAGCCGGGATGAAGGCCTCCACACCGATTTTGCATG 7446603 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1303333277051694