Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Echinococcus_20multilocularis_20[genbank_20GCA_5F000469725.3_202015- 12-10] 1,217 sequences; 114,963,228 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq1207 96.9 3e-15 >seq1207 Length=20116479 Score = 96.9 bits (106), Expect = 3e-15 Identities = 161/233 (69%), Gaps = 0/233 (0%) Strand=Plus/Minus Query 23985 AACAAAATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCATCGAAGTCGAG 24044 ||||||||||| | || |||||||| | ||||||||| | || || | || || ||| Sbjct 17430971 AACAAAATGCAGATTTTCGTAAAAACTCTTACTGGAAAAACTATAACACTTGAGGTTGAG 17430912 Query 24045 GCCAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAGGCATACCTCCC 24104 | | || |||||||| | || ||| || ||| || ||||| || ||||| || Sbjct 17430911 CCAAGTGATTCCATCGAGAACGTGAAAGCGAAAATTCAGGATAAAGAGGGTATACCGCCA 17430852 Query 24105 GATCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAAACGTCAGCGAT 24164 ||||| || | || || | || || |||||| | || |||| ||| | | ||| Sbjct 17430851 GATCAGCAACGCCTTATCTTCGCTGGTAAGCAATTAGAGGATGGGCGAACCCTATCCGAC 17430792 Query 24165 TATAACATTCAAAAAGAATCTACAATTCATTTAGTGTTAAGATTGAGAGGAGG 24217 || || |||||||| || || ||| |||| | || ||||| | ||||||| Sbjct 17430791 TACAATATTCAAAAGGAGTCGACACTTCACCTTGTTCTAAGACTACGAGGAGG 17430739 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429929623108635