Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Echinococcus_20multilocularis_20[genbank_20GCA_5F000469725.3_202015-
12-10] 1,217 sequences; 114,963,228 total letters
Query= NC_008168.1
Length=104710
Score E
Sequences producing significant alignments: (Bits) Value
seq1214 136 3e-27
seq1212 136 3e-27
seq1210 136 3e-27
seq1209 136 3e-27
seq1112 136 3e-27
seq928 136 3e-27
seq858 136 3e-27
seq612 136 3e-27
seq597 136 3e-27
seq586 136 3e-27
seq532 136 3e-27
seq528 136 3e-27
seq381 136 3e-27
seq245 136 3e-27
seq208 136 3e-27
seq44 136 3e-27
seq1213 131 1e-25
seq1067 131 1e-25
seq1217 118 7e-22
seq1211 104 2e-17
seq1207 104 2e-17
seq975 104 2e-17
seq1150 98.7 7e-16
seq1069 98.7 7e-16
seq1025 98.7 7e-16
seq878 98.7 7e-16
seq402 98.7 7e-16
seq280 98.7 7e-16
seq205 98.7 7e-16
seq1215 86.0 4e-12
>seq1214
Length=6203119
Score = 136 bits (150), Expect = 3e-27
Identities = 88/95 (93%), Gaps = 5/95 (5%)
Strand=Plus/Minus
Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG--GGTA---ATCTCGT 25956
|||||||||||||||||||||||||||||||||||||||||||| ||| |||||||
Sbjct 6039021 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTAGGGATCTCGT 6038962
Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991
|||||| ||||||||||||||||||||||||||||
Sbjct 6038961 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 6038927
Score = 136 bits (150), Expect = 3e-27
Identities = 88/95 (93%), Gaps = 5/95 (5%)
Strand=Plus/Minus
Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG--GGTA---ATCTCGT 25956
|||||||||||||||||||||||||||||||||||||||||||| ||| |||||||
Sbjct 6147927 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTAGGGATCTCGT 6147868
Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991
|||||| ||||||||||||||||||||||||||||
Sbjct 6147867 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 6147833
Score = 98.7 bits (108), Expect = 7e-16
Identities = 71/82 (87%), Gaps = 0/82 (0%)
Strand=Plus/Minus
Query 19941 TCATTTCTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGG 20000
|| || ||||||||||| ||| |||||||||||||||||||||||||||| |||||||||
Sbjct 6035693 TCTTTACTCTCTCTTCAGAGTACTTTTCAACTTTCCCTCACGGTACTTGTCCGCTATCGG 6035634
Query 20001 TCTCGCGGTAATATTTAGCCTT 20022
|||| | |||||||||||
Sbjct 6035633 ACTCGTGCCTGTATTTAGCCTT 6035612
Score = 98.7 bits (108), Expect = 7e-16
Identities = 71/82 (87%), Gaps = 0/82 (0%)
Strand=Plus/Minus
Query 19941 TCATTTCTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGG 20000
|| || ||||||||||| ||| |||||||||||||||||||||||||||| |||||||||
Sbjct 6144610 TCTTTACTCTCTCTTCAGAGTACTTTTCAACTTTCCCTCACGGTACTTGTCCGCTATCGG 6144551
Query 20001 TCTCGCGGTAATATTTAGCCTT 20022
|||| | |||||||||||
Sbjct 6144550 ACTCGTGCCTGTATTTAGCCTT 6144529
>seq1212
Length=7212195
Score = 136 bits (150), Expect = 3e-27
Identities = 88/95 (93%), Gaps = 5/95 (5%)
Strand=Plus/Plus
Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG--GGTA---ATCTCGT 25956
|||||||||||||||||||||||||||||||||||||||||||| ||| |||||||
Sbjct 763258 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTAGGGATCTCGT 763317
Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991
|||||| ||||||||||||||||||||||||||||
Sbjct 763318 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 763352
>seq1210
Length=13762452
Score = 136 bits (150), Expect = 3e-27
Identities = 88/95 (93%), Gaps = 5/95 (5%)
Strand=Plus/Plus
Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG--GGTA---ATCTCGT 25956
|||||||||||||||||||||||||||||||||||||||||||| ||| |||||||
Sbjct 8090064 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTAGGGATCTCGT 8090123
Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991
|||||| ||||||||||||||||||||||||||||
Sbjct 8090124 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 8090158
Score = 136 bits (150), Expect = 3e-27
Identities = 87/95 (92%), Gaps = 5/95 (5%)
Strand=Plus/Minus
Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956
|||||||||||||||||||||||||||||||||||||||||||| || |||||||
Sbjct 9902925 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGGATCTCGT 9902866
Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991
|||||| ||||||||||||||||||||||||||||
Sbjct 9902865 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 9902831
Score = 98.7 bits (108), Expect = 7e-16
Identities = 71/82 (87%), Gaps = 0/82 (0%)
Strand=Plus/Plus
Query 19941 TCATTTCTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGG 20000
|| || ||||||||||| ||| |||||||||||||||||||||||||||| |||||||||
Sbjct 8093133 TCTTTACTCTCTCTTCAGAGTACTTTTCAACTTTCCCTCACGGTACTTGTCCGCTATCGG 8093192
Query 20001 TCTCGCGGTAATATTTAGCCTT 20022
|||| | |||||||||||
Sbjct 8093193 ACTCGTGCCTGTATTTAGCCTT 8093214
Score = 95.1 bits (104), Expect = 8e-15
Identities = 70/82 (85%), Gaps = 0/82 (0%)
Strand=Plus/Minus
Query 19941 TCATTTCTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGG 20000
|| || ||||||||||| ||| |||||||||||| ||||||||||||||| |||||||||
Sbjct 9899687 TCTTTGCTCTCTCTTCAGAGTACTTTTCAACTTTTCCTCACGGTACTTGTCCGCTATCGG 9899628
Query 20001 TCTCGCGGTAATATTTAGCCTT 20022
|||| | |||||||||||
Sbjct 9899627 ACTCGTGCCTGTATTTAGCCTT 9899606
>seq1209
Length=14622995
Score = 136 bits (150), Expect = 3e-27
Identities = 88/95 (93%), Gaps = 5/95 (5%)
Strand=Plus/Minus
Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG--GGTA---ATCTCGT 25956
|||||||||||||||||||||||||||||||||||||||||||| ||| |||||||
Sbjct 11989902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTAGGGATCTCGT 11989843
Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991
|||||| ||||||||||||||||||||||||||||
Sbjct 11989842 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 11989808
Score = 95.1 bits (104), Expect = 8e-15
Identities = 70/82 (85%), Gaps = 0/82 (0%)
Strand=Plus/Minus
Query 19941 TCATTTCTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGG 20000
|| || ||||||||||| ||| ||||||||||||||||||||||||||| |||||||||
Sbjct 14434326 TCTTTACTCTCTCTTCAGAGTACTTTTCAACTTTCCCTCACGGTACTTGCCCGCTATCGG 14434267
Query 20001 TCTCGCGGTAATATTTAGCCTT 20022
|||| | |||||||||||
Sbjct 14434266 ACTCGTGTCTGTATTTAGCCTT 14434245
>seq1112
Length=4721
Score = 136 bits (150), Expect = 3e-27
Identities = 88/95 (93%), Gaps = 5/95 (5%)
Strand=Plus/Plus
Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG--GGTA---ATCTCGT 25956
|||||||||||||||||||||||||||||||||||||||||||| ||| |||||||
Sbjct 3485 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTAGGGATCTCGT 3544
Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991
|||||| ||||||||||||||||||||||||||||
Sbjct 3545 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 3579
>seq928
Length=2231
Score = 136 bits (150), Expect = 3e-27
Identities = 88/95 (93%), Gaps = 5/95 (5%)
Strand=Plus/Plus
Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG--GGTA---ATCTCGT 25956
|||||||||||||||||||||||||||||||||||||||||||| ||| |||||||
Sbjct 466 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTAGGGATCTCGT 525
Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991
|||||| ||||||||||||||||||||||||||||
Sbjct 526 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 560
>seq858
Length=23843
Score = 136 bits (150), Expect = 3e-27
Identities = 88/95 (93%), Gaps = 5/95 (5%)
Strand=Plus/Plus
Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG--GGTA---ATCTCGT 25956
|||||||||||||||||||||||||||||||||||||||||||| ||| |||||||
Sbjct 15341 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTAGGGATCTCGT 15400
Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991
|||||| ||||||||||||||||||||||||||||
Sbjct 15401 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 15435
>seq612
Length=2605
Score = 136 bits (150), Expect = 3e-27
Identities = 88/95 (93%), Gaps = 5/95 (5%)
Strand=Plus/Minus
Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG--GGTA---ATCTCGT 25956
|||||||||||||||||||||||||||||||||||||||||||| ||| |||||||
Sbjct 2297 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTAGGGATCTCGT 2238
Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991
|||||| ||||||||||||||||||||||||||||
Sbjct 2237 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 2203
>seq597
Length=45338
Score = 136 bits (150), Expect = 3e-27
Identities = 88/95 (93%), Gaps = 5/95 (5%)
Strand=Plus/Plus
Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG--GGTA---ATCTCGT 25956
|||||||||||||||||||||||||||||||||||||||||||| ||| |||||||
Sbjct 6372 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTAGGGATCTCGT 6431
Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991
|||||| ||||||||||||||||||||||||||||
Sbjct 6432 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 6466
>seq586
Length=3128
Score = 136 bits (150), Expect = 3e-27
Identities = 88/95 (93%), Gaps = 5/95 (5%)
Strand=Plus/Plus
Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG--GGTA---ATCTCGT 25956
|||||||||||||||||||||||||||||||||||||||||||| ||| |||||||
Sbjct 1711 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTAGGGATCTCGT 1770
Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991
|||||| ||||||||||||||||||||||||||||
Sbjct 1771 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 1805
>seq532
Length=10363
Score = 136 bits (150), Expect = 3e-27
Identities = 88/95 (93%), Gaps = 5/95 (5%)
Strand=Plus/Plus
Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG--GGTA---ATCTCGT 25956
|||||||||||||||||||||||||||||||||||||||||||| ||| |||||||
Sbjct 1745 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTAGGGATCTCGT 1804
Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991
|||||| ||||||||||||||||||||||||||||
Sbjct 1805 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 1839
>seq528
Length=7863
Score = 136 bits (150), Expect = 3e-27
Identities = 88/95 (93%), Gaps = 5/95 (5%)
Strand=Plus/Plus
Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG--GGTA---ATCTCGT 25956
|||||||||||||||||||||||||||||||||||||||||||| ||| |||||||
Sbjct 6002 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTAGGGATCTCGT 6061
Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991
|||||| ||||||||||||||||||||||||||||
Sbjct 6062 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 6096
>seq381
Length=24879
Score = 136 bits (150), Expect = 3e-27
Identities = 88/95 (93%), Gaps = 5/95 (5%)
Strand=Plus/Minus
Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG--GGTA---ATCTCGT 25956
|||||||||||||||||||||||||||||||||||||||||||| ||| |||||||
Sbjct 12357 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTAGGGATCTCGT 12298
Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991
|||||| ||||||||||||||||||||||||||||
Sbjct 12297 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 12263
Score = 98.7 bits (108), Expect = 7e-16
Identities = 71/82 (87%), Gaps = 0/82 (0%)
Strand=Plus/Minus
Query 19941 TCATTTCTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGG 20000
|| || ||||||||||| ||| |||||||||||||||||||||||||||| |||||||||
Sbjct 9049 TCTTTACTCTCTCTTCAGAGTACTTTTCAACTTTCCCTCACGGTACTTGTCCGCTATCGG 8990
Query 20001 TCTCGCGGTAATATTTAGCCTT 20022
|||| | |||||||||||
Sbjct 8989 ACTCGTGCCTGTATTTAGCCTT 8968
>seq245
Length=9392
Score = 136 bits (150), Expect = 3e-27
Identities = 88/95 (93%), Gaps = 5/95 (5%)
Strand=Plus/Plus
Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG--GGTA---ATCTCGT 25956
|||||||||||||||||||||||||||||||||||||||||||| ||| |||||||
Sbjct 4986 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTAGGGATCTCGT 5045
Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991
|||||| ||||||||||||||||||||||||||||
Sbjct 5046 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 5080
>seq208
Length=41862
Score = 136 bits (150), Expect = 3e-27
Identities = 88/95 (93%), Gaps = 5/95 (5%)
Strand=Plus/Plus
Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG--GGTA---ATCTCGT 25956
|||||||||||||||||||||||||||||||||||||||||||| ||| |||||||
Sbjct 23793 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTAGGGATCTCGT 23852
Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991
|||||| ||||||||||||||||||||||||||||
Sbjct 23853 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 23887
Score = 98.7 bits (108), Expect = 7e-16
Identities = 71/82 (87%), Gaps = 0/82 (0%)
Strand=Plus/Plus
Query 19941 TCATTTCTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGG 20000
|| || ||||||||||| ||| |||||||||||||||||||||||||||| |||||||||
Sbjct 27125 TCTTTACTCTCTCTTCAGAGTACTTTTCAACTTTCCCTCACGGTACTTGTCCGCTATCGG 27184
Query 20001 TCTCGCGGTAATATTTAGCCTT 20022
|||| | |||||||||||
Sbjct 27185 ACTCGTGCCTGTATTTAGCCTT 27206
>seq44
Length=15421
Score = 136 bits (150), Expect = 3e-27
Identities = 88/95 (93%), Gaps = 5/95 (5%)
Strand=Plus/Plus
Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG--GGTA---ATCTCGT 25956
|||||||||||||||||||||||||||||||||||||||||||| ||| |||||||
Sbjct 166 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTAGGGATCTCGT 225
Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991
|||||| ||||||||||||||||||||||||||||
Sbjct 226 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 260
>seq1213
Length=7437389
Score = 131 bits (144), Expect = 1e-25
Identities = 87/95 (92%), Gaps = 5/95 (5%)
Strand=Plus/Plus
Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG--GGTA---ATCTCGT 25956
|||||||||||||||||||||||||||||||||||||||||||| ||| |||||||
Sbjct 5203414 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTAGGGATCTCGT 5203473
Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991
|||||| |||||||| |||||||||||||||||||
Sbjct 5203474 TAATCCATTCATGCGAGTCACTAATTAGATGACGA 5203508
Score = 131 bits (144), Expect = 1e-25
Identities = 87/95 (92%), Gaps = 5/95 (5%)
Strand=Plus/Minus
Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG--GGTA---ATCTCGT 25956
|||||||||||||||||||||||||||||||||||||||||||| ||| |||||||
Sbjct 5293392 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTAGGGATCTCGT 5293333
Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991
|||||| |||||||| |||||||||||||||||||
Sbjct 5293332 TAATCCATTCATGCGAGTCACTAATTAGATGACGA 5293298
Score = 100 bits (110), Expect = 2e-16
Identities = 160/230 (70%), Gaps = 0/230 (0%)
Strand=Plus/Plus
Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148
||||||| | | ||| | ||||| ||||| || |||||| ||||| ||||| || |
Sbjct 1838096 TACCACCACGAAGACGAAGCACCAGGTGAAGTGTCGACTCCTTCTGAATGTTGTAGTCGG 1838155
Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208
| | || |||| || || || ||||| || ||||| || || || ||||| | |
Sbjct 1838156 AAAGGGTGCGGCCGTCTTCCAACTGCTTTCCCGCGAATATCAGACGCTGCTGATCCGGTG 1838215
Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAA 38268
| | |||||||||||| || || |||||| || | | | || | | ||||
Sbjct 1838216 GAATGCCTTCTTTGTCTTGTATCTTAGCCTTCACGTTTTCTATCGAGTCACTAGGCTCAA 1838275
Query 38269 CTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATG 38318
| || || |||||||| || || || | || ||||||||||||||||||
Sbjct 1838276 CCTCCAAAGTAATAGTCTTTCCAGTGAGTGTCTTCACGAATATCTGCATG 1838325
Score = 89.7 bits (98), Expect = 3e-13
Identities = 69/82 (84%), Gaps = 0/82 (0%)
Strand=Plus/Plus
Query 19941 TCATTTCTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGG 20000
|| || | ||||||||| ||| |||||||||||||||||| ||||||||| |||||||||
Sbjct 5205840 TCTTTACCCTCTCTTCAGAGTACTTTTCAACTTTCCCTCATGGTACTTGTCCGCTATCGG 5205899
Query 20001 TCTCGCGGTAATATTTAGCCTT 20022
|||| | |||||||||||
Sbjct 5205900 ACTCGTGCCTGTATTTAGCCTT 5205921
Score = 89.7 bits (98), Expect = 3e-13
Identities = 69/82 (84%), Gaps = 0/82 (0%)
Strand=Plus/Minus
Query 19941 TCATTTCTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGG 20000
|| || | ||||||||| ||| |||||||||||||||||| ||||||||| |||||||||
Sbjct 5290966 TCTTTACCCTCTCTTCAGAGTACTTTTCAACTTTCCCTCATGGTACTTGTCCGCTATCGG 5290907
Query 20001 TCTCGCGGTAATATTTAGCCTT 20022
|||| | |||||||||||
Sbjct 5290906 ACTCGTGCCTGTATTTAGCCTT 5290885
Score = 89.7 bits (98), Expect = 3e-13
Identities = 78/96 (81%), Gaps = 6/96 (6%)
Strand=Plus/Plus
Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG-----GGTAATCTCGT 25956
||||| | ||||||||||||| ||||||||||| |||| |||| | |||||| |
Sbjct 6109963 AAGCCTGCTCCCTTGGCTGTGATTTCGCTAGATGGTAGCCAGGGCCAATAGAAATCTCAT 6110022
Query 25957 TAATCCT-TTCATGCGCGTCACTAATTAGATGACGA 25991
|||| | |||||||||||||||| |||||||||||
Sbjct 6110023 TAATTTTATTCATGCGCGTCACTAGTTAGATGACGA 6110058
Score = 82.4 bits (90), Expect = 5e-11
Identities = 158/231 (68%), Gaps = 4/231 (2%)
Strand=Plus/Minus
Query 38089 TACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAG 38148
||||||| | | ||| | ||||| ||||| || |||||| ||||||||||| || |
Sbjct 1844346 TACCACCACGAAGACGAAGCACCAGGTGAAGTGTCGACTCCTTCTGAATATTGTAGTCGG 1844287
Query 38149 ACAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGG 38208
| | || |||| || || || ||||| || ||||| || || || ||||| | |
Sbjct 1844286 AAAGGGTGCGGCCGTCTTCCAACTGCTTTCCCGCGAATATCAGACGCTGCTGATCCGGTG 1844227
Query 38209 GGACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGA--CAGTATCTCCACTTTC 38266
| | ||| || |||||| || || ||||||||||| | ||| ||| | ||
Sbjct 1844226 GAATGCCCTCCTTGTCCTGGATCTTCGCCTTCACATTCTCAATCGAGTCACTCGGC--TC 1844169
Query 38267 AACTTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCAT 38317
|| || | ||| || || || || || | || ||||| || ||||||||
Sbjct 1844168 CACCTCAAGTGTGATGGTCTTGCCAGTAAGCGTCTTCACAAAGATCTGCAT 1844118
>seq1067
Length=1507
Score = 131 bits (144), Expect = 1e-25
Identities = 87/95 (92%), Gaps = 5/95 (5%)
Strand=Plus/Plus
Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG--GGTA---ATCTCGT 25956
||||||||||||| |||||||||||||||||||||||||||||| ||| |||||||
Sbjct 3 AAGCCCGTTCCCTGGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTAGGGATCTCGT 62
Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991
|||||| ||||||||||||||||||||||||||||
Sbjct 63 TAATCCATTCATGCGCGTCACTAATTAGATGACGA 97
>seq1217
Length=794059
Score = 118 bits (130), Expect = 7e-22
Identities = 84/95 (88%), Gaps = 5/95 (5%)
Strand=Plus/Minus
Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGG--GGTA---ATCTCGT 25956
|||||||||||||||||||||||||||||||||||||||| ||| ||| |||||||
Sbjct 61882 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATGGGGACAGTAGAGATCTCGT 61823
Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991
|||||| ||||||||||||| | ||| ||||||||
Sbjct 61822 TAATCCATTCATGCGCGTCAATCATTGGATGACGA 61788
>seq1211
Length=11859842
Score = 104 bits (114), Expect = 2e-17
Identities = 80/95 (84%), Gaps = 5/95 (5%)
Strand=Plus/Minus
Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGG-----GTAATCTCGT 25956
|| |||||| |||||||||||||| |||||||||||||| ||| | ||||||||
Sbjct 5042398 AATCCCGTTTCCTTGGCTGTGGTTCGGCTAGATAGTAGATGGGGACAGTAGGAATCTCGT 5042339
Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991
|||||| ||||||||| | ||||||||||||||||
Sbjct 5042338 TAATCCATTCATGCGCATTACTAATTAGATGACGA 5042304
Score = 104 bits (114), Expect = 2e-17
Identities = 80/95 (84%), Gaps = 5/95 (5%)
Strand=Plus/Plus
Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGG-----GTAATCTCGT 25956
|| |||||| |||||||||||||| |||||||||||||| ||| | ||||||||
Sbjct 5081229 AATCCCGTTTCCTTGGCTGTGGTTCGGCTAGATAGTAGATGGGGACAGTAGGAATCTCGT 5081288
Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991
|||||| ||||||||| | ||||||||||||||||
Sbjct 5081289 TAATCCATTCATGCGCATTACTAATTAGATGACGA 5081323
>seq1207
Length=20116479
Score = 104 bits (114), Expect = 2e-17
Identities = 149/209 (71%), Gaps = 6/209 (3%)
Strand=Plus/Plus
Query 38115 TGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGACAAAACACGTTCGTCGTCTAATTGT 38174
||||| || |||||||||||||||||| || || | || | || ||||||||
Sbjct 17430763 TGAAGTGTCGACTCCTTTTGAATATTGTAGTCGGATAGGGTTCGCCCATCCTCTAATTGC 17430822
Query 38175 TTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGGGACGCCTTCTTTGTCCATAATTTTT 38234
|| || || || || |||||||| ||||| | || | || ||||| ||| ||||||
Sbjct 17430823 TTACCAGCGAAGATAAGGCGTTGCTGATCTGGCGGTATACCCTCTTTATCCTGAATTTTC 17430882
Query 38235 TGCTTCACATTCTGGACAGTATCTCCACTT---TCAACTTCTAATGTAATAGTTTTACCC 38291
||||| |||| || | || ||||| ||||| || | ||| |||||||| ||
Sbjct 17430883 GCTTTCACGTTCTCGATGGAAT---CACTTGGCTCAACCTCAAGTGTTATAGTTTTTCCA 17430939
Query 38292 GTCAAGGTTTTCACGAATATCTGCATGTT 38320
|| | ||||| ||||| |||||||| ||
Sbjct 17430940 GTAAGAGTTTTTACGAAAATCTGCATTTT 17430968
Score = 89.7 bits (98), Expect = 3e-13
Identities = 157/229 (69%), Gaps = 0/229 (0%)
Strand=Plus/Plus
Query 38090 ACCACCTCTCAAACGCAACACCAAATGAAGAGTGCTCTCCTTTTGAATATTGTAATCAGA 38149
|||||| | | ||| | ||| | ||||| || |||||| ||||||||||| |||||
Sbjct 13120217 ACCACCACGAAGACGAAGCACAAGGTGAAGGGTTGACTCCTTCTGAATATTGTAGTCAGA 13120276
Query 38150 CAAAACACGTTCGTCGTCTAATTGTTTTCCGGCAAATATTAGGCGTTGTTGATCGGAGGG 38209
|| || | || || || || || || ||||| || || || || ||||| | ||
Sbjct 13120277 TAAGGACCGCCCATCCTCCAACTGCTTGCCAGCAAAAATAAGACGCTGCTGATCTGGTGG 13120336
Query 38210 GACGCCTTCTTTGTCCATAATTTTTTGCTTCACATTCTGGACAGTATCTCCACTTTCAAC 38269
| || || ||||| ||| || ||| ||||||| | || ||| | || ||
Sbjct 13120337 AATACCCTCCTTGTCTTGAATCTTAGCCTTTACATTCTCAATAGAATCAGAAGGCTCGAC 13120396
Query 38270 TTCTAATGTAATAGTTTTACCCGTCAAGGTTTTCACGAATATCTGCATG 38318
|| | || |||||||| || || | ||||||||||| |||||||||
Sbjct 13120397 CTCAAGAGTTATAGTTTTGCCAGTAAGAGTTTTCACGAAAATCTGCATG 13120445
>seq975
Length=1065
Score = 104 bits (114), Expect = 2e-17
Identities = 80/95 (84%), Gaps = 5/95 (5%)
Strand=Plus/Plus
Query 25902 AAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGG-----GTAATCTCGT 25956
|| |||||| |||||||||||||| |||||||||||||| ||| | ||||||||
Sbjct 759 AATCCCGTTTCCTTGGCTGTGGTTCGGCTAGATAGTAGATGGGGACAGTAGGAATCTCGT 818
Query 25957 TAATCCTTTCATGCGCGTCACTAATTAGATGACGA 25991
|||||| ||||||||| | ||||||||||||||||
Sbjct 819 TAATCCATTCATGCGCATTACTAATTAGATGACGA 853
>seq1150
Length=7614
Score = 98.7 bits (108), Expect = 7e-16
Identities = 71/82 (87%), Gaps = 0/82 (0%)
Strand=Plus/Plus
Query 19941 TCATTTCTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGG 20000
|| || ||||||||||| ||| |||||||||||||||||||||||||||| |||||||||
Sbjct 7076 TCTTTACTCTCTCTTCAGAGTACTTTTCAACTTTCCCTCACGGTACTTGTCCGCTATCGG 7135
Query 20001 TCTCGCGGTAATATTTAGCCTT 20022
|||| | |||||||||||
Sbjct 7136 ACTCGTGCCTGTATTTAGCCTT 7157
>seq1069
Length=9581
Score = 98.7 bits (108), Expect = 7e-16
Identities = 71/82 (87%), Gaps = 0/82 (0%)
Strand=Plus/Plus
Query 19941 TCATTTCTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGG 20000
|| || ||||||||||| ||| |||||||||||||||||||||||||||| |||||||||
Sbjct 8116 TCTTTACTCTCTCTTCAGAGTACTTTTCAACTTTCCCTCACGGTACTTGTCCGCTATCGG 8175
Query 20001 TCTCGCGGTAATATTTAGCCTT 20022
|||| | |||||||||||
Sbjct 8176 ACTCGTGCCTGTATTTAGCCTT 8197
>seq1025
Length=4019
Score = 98.7 bits (108), Expect = 7e-16
Identities = 71/82 (87%), Gaps = 0/82 (0%)
Strand=Plus/Plus
Query 19941 TCATTTCTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGG 20000
|| || ||||||||||| ||| |||||||||||||||||||||||||||| |||||||||
Sbjct 748 TCTTTACTCTCTCTTCAGAGTACTTTTCAACTTTCCCTCACGGTACTTGTCCGCTATCGG 807
Query 20001 TCTCGCGGTAATATTTAGCCTT 20022
|||| | |||||||||||
Sbjct 808 ACTCGTGCCTGTATTTAGCCTT 829
>seq878
Length=3344
Score = 98.7 bits (108), Expect = 7e-16
Identities = 71/82 (87%), Gaps = 0/82 (0%)
Strand=Plus/Minus
Query 19941 TCATTTCTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGG 20000
|| || ||||||||||| ||| |||||||||||||||||||||||||||| |||||||||
Sbjct 2480 TCTTTACTCTCTCTTCAGAGTACTTTTCAACTTTCCCTCACGGTACTTGTCCGCTATCGG 2421
Query 20001 TCTCGCGGTAATATTTAGCCTT 20022
|||| | |||||||||||
Sbjct 2420 ACTCGTGCCTGTATTTAGCCTT 2399
>seq402
Length=1867
Score = 98.7 bits (108), Expect = 7e-16
Identities = 71/82 (87%), Gaps = 0/82 (0%)
Strand=Plus/Minus
Query 19941 TCATTTCTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGG 20000
|| || ||||||||||| ||| |||||||||||||||||||||||||||| |||||||||
Sbjct 176 TCTTTACTCTCTCTTCAGAGTACTTTTCAACTTTCCCTCACGGTACTTGTCCGCTATCGG 117
Query 20001 TCTCGCGGTAATATTTAGCCTT 20022
|||| | |||||||||||
Sbjct 116 ACTCGTGCCTGTATTTAGCCTT 95
>seq280
Length=5146
Score = 98.7 bits (108), Expect = 7e-16
Identities = 71/82 (87%), Gaps = 0/82 (0%)
Strand=Plus/Plus
Query 19941 TCATTTCTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGG 20000
|| || ||||||||||| ||| |||||||||||||||||||||||||||| |||||||||
Sbjct 1745 TCTTTACTCTCTCTTCAGAGTACTTTTCAACTTTCCCTCACGGTACTTGTCCGCTATCGG 1804
Query 20001 TCTCGCGGTAATATTTAGCCTT 20022
|||| | |||||||||||
Sbjct 1805 ACTCGTGCCTGTATTTAGCCTT 1826
>seq205
Length=7450
Score = 98.7 bits (108), Expect = 7e-16
Identities = 71/82 (87%), Gaps = 0/82 (0%)
Strand=Plus/Plus
Query 19941 TCATTTCTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGG 20000
|| || ||||||||||| ||| |||||||||||||||||||||||||||| |||||||||
Sbjct 1228 TCTTTACTCTCTCTTCAGAGTACTTTTCAACTTTCCCTCACGGTACTTGTCCGCTATCGG 1287
Query 20001 TCTCGCGGTAATATTTAGCCTT 20022
|||| | |||||||||||
Sbjct 1288 ACTCGTGCCTGTATTTAGCCTT 1309
>seq1215
Length=4267853
Score = 86.0 bits (94), Expect = 4e-12
Identities = 68/82 (83%), Gaps = 0/82 (0%)
Strand=Plus/Minus
Query 19941 TCATTTCTCTCTCTTCAAAGTTCTTTTCAACTTTCCCTCACGGTACTTGTTCGCTATCGG 20000
|| || ||||||||||| ||| ||||||||||||||||||||||| |||| ||||||| |
Sbjct 956075 TCTTTACTCTCTCTTCAGAGTACTTTTCAACTTTCCCTCACGGTAATTGTCCGCTATCAG 956016
Query 20001 TCTCGCGGTAATATTTAGCCTT 20022
|| | | |||||||||||
Sbjct 956015 ACTTGTGCCTGTATTTAGCCTT 955994
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 334942232000327
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |