Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Echinococcus_20multilocularis_20[genbank_20GCA_5F000469725.3_202015-
12-10] 1,217 sequences; 114,963,228 total letters
Query= NC_016924.1
Length=185139
Score E
Sequences producing significant alignments: (Bits) Value
seq1209 187 3e-42
>seq1209
Length=14622995
Score = 187 bits (206), Expect = 3e-42
Identities = 468/703 (67%), Gaps = 16/703 (2%)
Strand=Plus/Minus
Query 37002 AGAAGCCTATCCGCAACAAATTCTATGTATTTACACATTAGTTCATAGTTTATACCAATT 37061
|| |||| ||| |||||||| |||||||| |||||||| | | || || |||||
Sbjct 7446777 AGTAGCCGATCGGCAACAAACCTTATGTATTGGCACATTAGGCGACAATTCATGCCAATA 7446718
Query 37062 AGTTTTACTGGAATTGCATCTTGAAGAAATAGTTTTTCTATTATTACAGCATCTTTAACT 37121
|| || || || | ||| ||| |||||| ||| || | || || || | |
Sbjct 7446717 AGATTGACAGGTAATGCGTCTGTGAGAAATTCGCATTCAATGCTAACCGCCTCCCTCATA 7446658
Query 37122 ATATTAACAATAACTTCTTCAGTTGGGGGATATTTTA-AATAT-TTAAACAATAAA-CAT 37178
|| | || |||| | | | | || | || | ||||| || || ||||| |||
Sbjct 7446657 ATGT---CATAAACTCTTGCTGCCGTAGGTTTGTTGACAATATGTTTAAAAATAAGGCAT 7446601
Query 37179 GCAAAATCACAATGTAAACCTTCATCTCTACTTATCAATTCATTAGAAAAGGTTAATCCT 37238
|||||||| || | |||||||| | || ||||| || || ||||| | |||
Sbjct 7446600 GCAAAATCGGTGTGGAGGCCTTCATCCCGGCTGATCAACTCGTTGCTGAAGGTGAGGCCT 7446541
Query 37239 GGCATTAAACCTCtttttttAATCCAAAATATTGCTGCAAAAGATCCAGAAAAGAAAATA 37298
||||| | ||| | || || | |||||| || | ||||| || |||||||||||||
Sbjct 7446540 GGCATGAGACCACGCTTCTTGAGCCAAAAGATAGAAGCAAATGAACCAGAAAAGAAAACG 7446481
Query 37299 CCTTCAACTGCTGCAAATGCTACAAGACGTGTACCGAAAGTTGAACTATAATCAGAAATC 37358
|||||||| || || ||||| || || || | || | | | | || | ||||
Sbjct 7446480 CCTTCAACAGCAGCGAATGCCACTAGCCGCTCAGCGTATGGGGCTTTCCTATTTGCAATC 7446421
Query 37359 CAtttttttGTCCAATCTGCCTTTAATTTAACACATTCAATTGTTTCAATTGCTTTTAAG 37418
|| | | |||||| || || ||||||| | || | || || || ||
Sbjct 7446420 CACCTAAGAGCCCAATCGGCTTTCTTAGCAACACATGGCAGCGTCTGAACGGCGTTAAAC 7446361
Query 37419 AGAAAGtttttttCTTCACT--ATCTGTTATATAAGTATCAATTAGTAAACTATACATTT 37476
| ||||| ||| |||| ||| | || || |||||||| || | | |||||||
Sbjct 7446360 AAAAAGTCGCGTTC--CACTGGATCCTTAATGTAGGTATCAATCAGAAGAGAGTACATTT 7446303
Query 37477 CAGAGTGAATATTTTCAATAGCTATCTGAAAACCATAAAAACACCTAGCTTCAGATAATT 37536
| || ||||| ||||| | || | || | || |||||||| | ||| || | | ||
Sbjct 7446302 CGGAATGAATGTTTTCGACGGCGACTTGCATCCCGTAAAAACAACGAGCCTCGGGAATTT 7446243
Query 37537 GAACATCGTTAAAAAACCTCTTAGCTAAGTTTTCATTAACTATCCCATCACTAGCTGCAA 37596
| || |||||| |||| || || || |||||||||||| || |||||||| |||||||
Sbjct 7446242 GGACTTCGTTACAAAAGTTCAAAGTTAGGTTTTCATTAACGATGCCATCACTGGCTGCAA 7446183
Query 37597 AGAAAGCAAGAACATATTTTATAAAATGTCTTT---CATCATTTGATAATTTTTTCCAAT 37653
| ||||| | |||||| ||| ||||| | || ||||||| | || |||||
Sbjct 7446182 AAAAAGCCAAAACATAAGATATGAAATGACGTTCGCCATCATT---AAGGCCTTCCCAAT 7446126
Query 37654 CATTAATATCTTTTGATAAATCAACTTCATCAACGGTCCAAAA 37696
|| | | || || | ||||| ||||| ||||| ||||||||
Sbjct 7446125 CAGTGAGGTCCTTCGCCAAATCGACTTCCTCAACTGTCCAAAA 7446083
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 592307789380680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |