Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Echinococcus_20multilocularis_20[genbank_20GCA_5F000469725.3_202015- 12-10] 1,217 sequences; 114,963,228 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq1209 104 4e-17 >seq1209 Length=14622995 Score = 104 bits (114), Expect = 4e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 48130 GCAGGCAAAGTCCCTGTGCAAGCCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAG 48189 ||| ||||| || |||| | |||||| ||||||||||| | | ||||| |||| ||| Sbjct 7446604 GCATGCAAAATCGGTGTGGAGGCCTTCATCCCGGCTGATCAACTCGTTGCTGAAGGTGAG 7446545 Query 48190 ACCAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAA 48249 || ||||||| || | || |||||||| || || | || || || ||||| ||||| Sbjct 7446544 GCCTGGCATGAGACCACGCTTCTTGAGCCAAAAGATAGAAGCAAATGAACCAGAAAAGAA 7446485 Query 48250 GATGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGA 48309 | ||| || || || ||||| || |||| ||| || | | || ||| | | || Sbjct 7446484 AACGCCTTCAACAGCAGCGAATGCCACTAGCCGCTCAGCGTATGGGGCTTTCCTATTTGC 7446425 Query 48310 GATCCAGGAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCT 48359 ||||| ||| ||||| || || ||||| | ||||||| ||||| Sbjct 7446424 AATCCACCTAAGAGCCCAATCGGCTTTCTTAGCAACACATGGCAGCGTCT 7446375 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931518629057280