Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Echinococcus_20multilocularis_20[genbank_20GCA_5F000469725.3_202015- 12-10] 1,217 sequences; 114,963,228 total letters Query= NC_019495.1 Length=290304 Score E Sequences producing significant alignments: (Bits) Value seq1207 95.1 2e-14 >seq1207 Length=20116479 Score = 95.1 bits (104), Expect = 2e-14 Identities = 164/233 (70%), Gaps = 4/233 (2%) Strand=Plus/Minus Query 222037 CTGCATGAAGAGGTCCGGGATCCACAGCGCCTGAAAGAGATCTCTGGTCCGCTGCTCCTC 222096 || |||||| || ||||| ||||| || || | || ||||||| | || ||||| Sbjct 7939237 CTTCATGAATAGATCCGGAATCCAAAGTGCAAGGAAAAGATCTCGCGCACGAGCTTCCTC 7939178 Query 222097 CACGCCGTTGTTTTTCCTCAGATCCAAAAACTCAAAAATGTCAGCGTGCCACGGCTCCAG 222156 | || |||| |||| | |||| ||||| | | || | |||||||| || || Sbjct 7939177 GGCACCAGTGTTCTTCCGTAATTCCACAAACTGCAGCACATCCGGATGCCACGGTTCGAG 7939118 Query 222157 ATAGACGGCCAGAGCGCCGGGTCGCTTGTTGCCACCCTGATCCACCATCCTCTCCAG-AG 222215 ||| | ||| | || ||||||||||| ||||| ||||||| || ||| | ||| | Sbjct 7939117 ATAAATGGCAAAGGCACCGGGTCGCTTATTGCCCCCCTGAT-CAACATACCGAGCAGTAC 7939059 Query 222216 CGTTGAAGATGCGAAGGGTCGGTACCAGTCCGTTGGA-TCGACCGTTGGTGCC 222267 |||||||| ||||| |||| || || |||||||| ||| || ||||| || Sbjct 7939058 TGTTGAAGACCCGAAGCATCGGCACAAGACCGTTGGACTCG-CCATTGGTCCC 7939007 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 928830669948480