Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Echinococcus_20multilocularis_20[genbank_20GCA_5F000469725.3_202015-
12-10] 1,217 sequences; 114,963,228 total letters
Query= NC_020852.1
Length=186468
Score E
Sequences producing significant alignments: (Bits) Value
seq1207 140 4e-28
>seq1207
Length=20116479
Score = 140 bits (154), Expect = 4e-28
Identities = 413/631 (65%), Gaps = 13/631 (2%)
Strand=Plus/Plus
Query 75212 CCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGTC 75271
|| ||||| ||||| ||||| ||| | ||||||||||| || || || ||||| |||
Sbjct 7938716 CCCCAGTATATGTTTATGCGCGTCTCTATCGGCATCCATGGTGAGGATCTTGATGCTGCT 7938775
Query 75272 TTGGAGACATACGACAAGATGTCCCAAGGTATGTTCATTCACGCAACACCAACCCTCTTC 75331
| ||||| ||| | |||||| || ||| |||| || |||| || || ||
Sbjct 7938776 ATTGAGACGTACAATCTCATGTCCGAAAAGTGGTTGGTTCATGCTTCACCCACTCTTTTT 7938835
Query 75332 AATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGAC 75391
|||||||| || || | || ||||||||||| ||||| | | | | || || |||
Sbjct 7938836 AATGCTGGGACGCCTAACCCTCAGATGTCCAGCTGCTTTTTGCTTACGATGAAAGATGAC 7938895
Query 75392 TCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGGG 75451
||| | || || |||| || || | | ||||| | |||||||| | |||||
Sbjct 7938896 AGTATCGAGGGCATATATGATACGCTCAAACAATGTGCACTTATCTCAAAAAGTGCTGGT 7938955
Query 75452 GGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAAAT 75511
|| ||||| | | | ||| | | | || || || ||||| |||
Sbjct 7938956 GGAATTGGTCTCAATGTTCATTGTATCCGGAGTAAGGGCACTTTCATCGCTGGGACCAAT 7939015
Query 75512 GGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTA 75571
|| | || | ||| || | || |||||||| || || ||| || || || |||||
Sbjct 7939016 GGCGAGTCCAACGGTCTTGTGCCGATGCTTCGGGTCTTCAACAGTACTGCTCGGTATGTT 7939075
Query 75572 AATCAAGCGGG------GCGTCGCAAGGGGTCCATCGCGGTCTACTTGGAACCATGGCAT 75625
|||| | ||| ||| | | || || | || | || | ||||| ||||||
Sbjct 7939076 GATCAGGGGGGCAATAAGCGACCC---GGTGCCTTTGCCATTTATCTCGAACCGTGGCAT 7939132
Query 75626 GCCGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCGGTGT 75685
| ||| | || |||| | || ||||| ||| |||| ||| || |||||
Sbjct 7939133 CCGGATGTGCTGCAGTTTGTGGAATTACGGAAGAACACTGGTGCCGAGGAAGCTCGTGCG 7939192
Query 75686 AGAGATCTCTTTTCAT-CCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGAGGG 75744
||||||| ||| | | | || |||||||| || || ||||||||||| ||||| | ||
Sbjct 7939193 CGAGATCT-TTTCCTTGCACTTTGGATTCCGGATCTATTCATGAAGCGTGTTGAAGCAGG 7939251
Query 75745 TGGTCAATGGTCTCTTTTCTGTCCAGAC-AAGGCACCAGGTCTCTCCGACGCGGTGGGTG 75803
||| | |||| | || | || || || || || ||||| | ||| | ||| |
Sbjct 7939252 TGGCCCATGGACCTTTATGGACCCCCACGAATGC-CCCGGTCTTGCTGACTCTTGGGGGG 7939310
Query 75804 AGGAGTTTGAAGCCCTCTACACAAAGTATGA 75834
|||| |||||| | |||||||||||||| ||
Sbjct 7939311 AGGAATTTGAAACGCTCTACACAAAGTACGA 7939341
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 596560524684960
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |