Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Echinococcus_20multilocularis_20[genbank_20GCA_5F000469725.3_202015-
12-10] 1,217 sequences; 114,963,228 total letters
Query= NC_021246.1
Length=281182
Score E
Sequences producing significant alignments: (Bits) Value
seq1207 116 7e-21
>seq1207
Length=20116479
Score = 116 bits (128), Expect = 7e-21
Identities = 169/239 (71%), Gaps = 0/239 (0%)
Strand=Plus/Plus
Query 193131 ATACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCG 193190
|| || |||| | || || || || || | ||| | ||| || |||||| ||||||
Sbjct 17430736 ATGCCTCCTCGTAGTCTTAGAACAAGGTGAAGTGTCGACTCCTTTTGAATATTGTAGTCG 17430795
Query 193191 GATAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGA 193250
|||| |||| ||| |||||||| || || || || || | | || ||||| ||
Sbjct 17430796 GATAGGGTTCGCCCATCCTCTAATTGCTTACCAGCGAAGATAAGGCGTTGCTGATCTGGC 17430855
Query 193251 GGTATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCA 193310
||||| || |||||||| || ||||| | ||| | || || | ||| | ||||
Sbjct 17430856 GGTATACCCTCTTTATCCTGAATTTTCGCTTTCACGTTCTCGATGGAATCACTTGGCTCA 17430915
Query 193311 ACTTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCATTTTATTAGT 193369
|| || || ||||||||||| || || || |||||||| || || |||||||| |||||
Sbjct 17430916 ACCTCAAGTGTTATAGTTTTTCCAGTAAGAGTTTTTACGAAAATCTGCATTTTGTTAGT 17430974
Score = 109 bits (120), Expect = 1e-18
Identities = 161/228 (71%), Gaps = 0/228 (0%)
Strand=Plus/Plus
Query 193133 ACCACCTCTCAATCGAAGTACCAGATGCAATGTAGCCTCTTTAGAAATATTATAGTCGGA 193192
|||||| | | ||||| || || || | || | ||| || |||||| ||||| ||
Sbjct 13120217 ACCACCACGAAGACGAAGCACAAGGTGAAGGGTTGACTCCTTCTGAATATTGTAGTCAGA 13120276
Query 193193 TAACGTTCTAGAATCGTCTAATTGTTTTCCGGCAAAAATTAATCTCTGTTGATCAGGAGG 193252
||| | | ||| || || || || || |||||||| | | ||| ||||| || ||
Sbjct 13120277 TAAGGACCGCCCATCCTCCAACTGCTTGCCAGCAAAAATAAGACGCTGCTGATCTGGTGG 13120336
Query 193253 TATTCCTTCTTTATCTTGTATTTTGGTTTTTATATTTAAAATAGTATCGGAAGACTCAAC 193312
|| || || || ||||| || || | |||| ||| ||||| ||| |||| ||| ||
Sbjct 13120337 AATACCCTCCTTGTCTTGAATCTTAGCCTTTACATTCTCAATAGAATCAGAAGGCTCGAC 13120396
Query 193313 TTCTAGAGTTATAGTTTTACCTGTTAGCGTTTTTACAAATATTTGCAT 193360
|| |||||||||||||| || || || ||||| || || || |||||
Sbjct 13120397 CTCAAGAGTTATAGTTTTGCCAGTAAGAGTTTTCACGAAAATCTGCAT 13120444
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 899640714007440
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |