Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Echinococcus_20multilocularis_20[genbank_20GCA_5F000469725.3_202015-
12-10] 1,217 sequences; 114,963,228 total letters
Query= NC_021247.1
Length=228750
Score E
Sequences producing significant alignments: (Bits) Value
seq1207 96.9 5e-15
>seq1207
Length=20116479
Score = 96.9 bits (106), Expect = 5e-15
Identities = 164/235 (70%), Gaps = 2/235 (1%)
Strand=Plus/Minus
Query 155816 TAATAAAATGCAAATATTTATTAAAACATTGACTGGAAAAACTATTACATTAGAAGTCGA 155875
||| |||||||| || || | ||||| | |||||||||||||| ||| | || || ||
Sbjct 17430972 TAACAAAATGCAGATTTTCGTAAAAACTCTTACTGGAAAAACTATAACACTTGAGGTTGA 17430913
Query 155876 AGATTCTGATAATATTTTAAACGTGAAAAATAAAATACAAGATAAAGAAGGCATACCTCC 155935
|||| || ||||||||| ||||| || |||||||| || ||||| ||
Sbjct 17430912 GCCAAGTGATTCCATCGAGAACGTGAAAGCGAAAATTCAGGATAAAGAGGGTATACCGCC 17430853
Query 155936 AGAACAACAAAGATTGATTTATGCCGGTAAGCAGCTCGAAGATACCAGAACTTTATCAGA 155995
||| || ||| | | || | || |||||||| | || ||| |||| |||| ||
Sbjct 17430852 AGATCAGCAACGCCTTATCTTCGCTGGTAAGCAATTAGAGGATGGGCGAACCCTATCCGA 17430793
Query 155996 TTATAATATATCCAAA-GAGGCGACGCTTCATTTAGTGTTAAGATTAAGAGGCGG 156049
|| ||||| || ||| ||| |||| ||||| | || ||||| || |||| ||
Sbjct 17430792 CTACAATAT-TCAAAAGGAGTCGACACTTCACCTTGTTCTAAGACTACGAGGAGG 17430739
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 731860866397200
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |