Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Echinococcus_20multilocularis_20[genbank_20GCA_5F000469725.3_202015- 12-10] 1,217 sequences; 114,963,228 total letters Query= NC_021248.1 Length=307691 Score E Sequences producing significant alignments: (Bits) Value seq1207 102 2e-16 >seq1207 Length=20116479 Score = 102 bits (112), Expect = 2e-16 Identities = 142/198 (72%), Gaps = 1/198 (1%) Strand=Plus/Plus Query 192347 CTTTAGAGATATTATAATCAGATAATGTTCGTTCATCATCCAATTGTTTACCAGCAAAGA 192406 |||| || ||||| || || |||| ||||| |||| || ||||| |||||||| |||| Sbjct 17430777 CTTTTGA-ATATTGTAGTCGGATAGGGTTCGCCCATCCTCTAATTGCTTACCAGCGAAGA 17430835 Query 192407 TTAATCTCTGTTGATCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAG 192466 | | | || ||||| || ||||| || |||||||| || ||||| ||| || || Sbjct 17430836 TAAGGCGTTGCTGATCTGGCGGTATACCCTCTTTATCCTGAATTTTCGCTTTCACGTTCT 17430895 Query 192467 TTATAGAATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATAA 192526 || ||||| | || || || || || || ||||| ||||| | ||||| | | Sbjct 17430896 CGATGGAATCACTTGGCTCAACCTCAAGTGTTATAGTTTTTCCAGTAAGAGTTTTTACGA 17430955 Query 192527 ATATCTGCATTTTATTAG 192544 | ||||||||||| |||| Sbjct 17430956 AAATCTGCATTTTGTTAG 17430973 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 984464649187950