Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Echinococcus_20multilocularis_20[genbank_20GCA_5F000469725.3_202015- 12-10] 1,217 sequences; 114,963,228 total letters Query= NC_021249.1 Length=282895 Score E Sequences producing significant alignments: (Bits) Value seq1207 105 1e-17 >seq1207 Length=20116479 Score = 105 bits (116), Expect = 1e-17 Identities = 133/183 (73%), Gaps = 0/183 (0%) Strand=Plus/Plus Query 171887 AATATTATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCT 171946 |||||| || || ||||| || || | || ||||| || || ||||||||||| | | Sbjct 13120262 AATATTGTAGTCAGATAAGGACCGCCCATCCTCCAACTGCTTGCCAGCAAAAATAAGACG 13120321 Query 171947 CTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGT 172006 ||| || || ||||| || || || || ||||| || ||| |||||||| |||| Sbjct 13120322 CTGCTGATCTGGTGGAATACCCTCCTTGTCTTGAATCTTAGCCTTTACATTCTCAATAGA 13120381 Query 172007 ATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTG 172066 ||| || | || || || ||||| || ||||| ||||| | ||||| | ||| ||||| Sbjct 13120382 ATCAGAAGGCTCGACCTCAAGAGTTATAGTTTTGCCAGTAAGAGTTTTCACGAAAATCTG 13120441 Query 172067 CAT 172069 ||| Sbjct 13120442 CAT 13120444 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 905122230618600