Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Echinococcus_20multilocularis_20[genbank_20GCA_5F000469725.3_202015-
12-10] 1,217 sequences; 114,963,228 total letters
Query= NC_021249.1
Length=282895
Score E
Sequences producing significant alignments: (Bits) Value
seq1207 105 1e-17
>seq1207
Length=20116479
Score = 105 bits (116), Expect = 1e-17
Identities = 133/183 (73%), Gaps = 0/183 (0%)
Strand=Plus/Plus
Query 171887 AATATTATAATCTGATAAAGATCGTTCGTCATCCAATTGTTTACCAGCAAAAATTAATCT 171946
|||||| || || ||||| || || | || ||||| || || ||||||||||| | |
Sbjct 13120262 AATATTGTAGTCAGATAAGGACCGCCCATCCTCCAACTGCTTGCCAGCAAAAATAAGACG 13120321
Query 171947 CTGTTGGTCAGGTGGTATTCCTTCTTTATCTTGTATTTTATTTTTTACATTAGTTATAGT 172006
||| || || ||||| || || || || ||||| || ||| |||||||| ||||
Sbjct 13120322 CTGCTGATCTGGTGGAATACCCTCCTTGTCTTGAATCTTAGCCTTTACATTCTCAATAGA 13120381
Query 172007 ATCTGACGATTCTACTTCTAGAGTAATGGTTTTACCAGTTAATGTTTTAATGAATATCTG 172066
||| || | || || || ||||| || ||||| ||||| | ||||| | ||| |||||
Sbjct 13120382 ATCAGAAGGCTCGACCTCAAGAGTTATAGTTTTGCCAGTAAGAGTTTTCACGAAAATCTG 13120441
Query 172067 CAT 172069
|||
Sbjct 13120442 CAT 13120444
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 905122230618600
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |