Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Echinococcus_20multilocularis_20[genbank_20GCA_5F000469725.3_202015-
12-10] 1,217 sequences; 114,963,228 total letters
Query= NC_021923.1
Length=140633
Score E
Sequences producing significant alignments: (Bits) Value
seq1213 104 2e-17
seq1207 100 3e-16
>seq1213
Length=7437389
Score = 104 bits (114), Expect = 2e-17
Identities = 149/210 (71%), Gaps = 0/210 (0%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||| || | || || || || || || |||||||| | || || || | |
Sbjct 1838324 ATGCAGATATTCGTGAAGACACTCACTGGAAAGACTATTACTTTGGAGGTTGAGCCTAGT 1838265
Query 24764 GACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCAA 24823
||| | |||||| || || ||||| |||||||||||||| || || || |||||
Sbjct 1838264 GACTCGATAGAAAACGTGAAGGCTAAGATACAAGACAAAGAAGGCATTCCACCGGATCAG 1838205
Query 24824 CAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAAC 24883
|| ||| |||| || || || || ||| |||| || | | | | || || || |||
Sbjct 1838204 CAGCGTCTGATATTCGCGGGAAAGCAGTTGGAAGACGGCCGCACCCTTTCCGACTACAAC 1838145
Query 24884 ATTCAAAAGGAATCGACACTACACTTGGTG 24913
||||| ||||| |||||||| ||| |||||
Sbjct 1838144 ATTCAGAAGGAGTCGACACTTCACCTGGTG 1838115
Score = 95.1 bits (104), Expect = 1e-14
Identities = 148/212 (70%), Gaps = 0/212 (0%)
Strand=Plus/Plus
Query 24702 CGATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCA 24761
|||||||||||||| | || ||||| || || || || || || || || || || | |
Sbjct 1844116 CGATGCAGATCTTTGTGAAGACGCTTACTGGCAAGACCATCACACTTGAGGTGGAGCCGA 1844175
Query 24762 CCGACACAGTAGAAACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATC 24821
||| | | || | || || |||||||| ||||| || || || || || ||||
Sbjct 1844176 GTGACTCGATTGAGAATGTGAAGGCGAAGATCCAGGACAAGGAGGGCATTCCACCGGATC 1844235
Query 24822 AACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATA 24881
| || ||| |||| || || || || ||| |||| || | | | | || || || |
Sbjct 1844236 AGCAGCGTCTGATATTCGCGGGAAAGCAGTTGGAAGACGGCCGCACCCTTTCCGACTACA 1844295
Query 24882 ACATTCAAAAGGAATCGACACTACACTTGGTG 24913
| ||||| ||||| |||||||| ||| |||||
Sbjct 1844296 ATATTCAGAAGGAGTCGACACTTCACCTGGTG 1844327
>seq1207
Length=20116479
Score = 100 bits (110), Expect = 3e-16
Identities = 161/229 (70%), Gaps = 2/229 (1%)
Strand=Plus/Minus
Query 24704 ATGCAGATCTTTATTAAAACGCTAACCGGTAAAACTATTACGCTCGAAGTAGAAGCCACC 24763
|||||||| || | ||||| || || || |||||||| || || || || || | |
Sbjct 17430965 ATGCAGATTTTCGTAAAAACTCTTACTGGAAAAACTATAACACTTGAGGTTGAGCCAAGT 17430906
Query 24764 GACACAGTAGA-AACGGTAAAACAAAAGATCCAAGACAAAGAAGGAATACCTCCCGATCA 24822
|| | | || |||| ||| | ||| || || || ||||| || ||||| || |||||
Sbjct 17430905 GATTCCATCGAGAACGTGAAAGCGAAA-ATTCAGGATAAAGAGGGTATACCGCCAGATCA 17430847
Query 24823 ACAACGTTTGATCTTTGCCGGGAAACAGCTGGAGGATTCGAGAAACATGTCAGATTATAA 24882
||||| | ||||| || || || || | |||||| | ||| | | || || || ||
Sbjct 17430846 GCAACGCCTTATCTTCGCTGGTAAGCAATTAGAGGATGGGCGAACCCTATCCGACTACAA 17430787
Query 24883 CATTCAAAAGGAATCGACACTACACTTGGTGTTGCGATTGCGCGGAGGC 24931
||||||||||| |||||||| ||| | || | || | || ||||||
Sbjct 17430786 TATTCAAAAGGAGTCGACACTTCACCTTGTTCTAAGACTACGAGGAGGC 17430738
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 449890755932760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |